| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3791 |
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| Symbol | |
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| ID | 8134778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4290631 |
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| End bp | 4291920 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644867098 |
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| Product | 16S rRNA methyltransferase B |
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| Protein accession | YP_003019342 |
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| Protein GI | 253690152 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.9333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCT CATACAATCT ACGCAGTATT GCCGCAAAAG TGGTGGGACA GGTTCTGGAT
CAGGGACAGT CACTCAGTGC CTTATTACCT GTTCATCAGC GTGAAGTTTC CGAGAAAGAT
CGCGCACTTT TACAAGAGCT TTGCTTTGGC GTATTGCGCG TTTTACCTCA GTTGGAGTGG
TGTATTCAGC AGCTGATGGC AAAACCTCTG ACGGGCAAAC AACGCACGCT GCATTACCTC
ATCATGGTCG GCATTTACCA ATTGCACTAT ACGAGAATCC CACCACATGC GGCTCTGGCA
GAAACGGTAG AAGGTGCAGT CGCACTAAAA CGGCCACAGC TCAAGGGGCT GATTAATGGC
GTATTGCGTC AATTCCAGCG CCAGCAGGAA GAACTCATTC AGCGTGAAGC AAATCACTCA
TCTCACTACC TGCATCCAAG CTGGCTACTA GCGCGTATTG AGCACGCCTA TCCAAATCAC
TGGCAAACTA TCGTTGAGGC GAATAATCAA CGTCCTCCGA TGTGGTTACG CGTAAATCGG
TTACACCATA CGCGGGAAGC GTACTTAAAT TTACTGGCAC AAGAGGGAAT TGAAGCATTC
CCTCACACTG AATTCACTGA TGCGATACGG CTTGCATCTC CTTGCGCAGT CGATCAACTA
CCGGGATTTT CACAAGGGTG GGCAACGGTG CAAGATGCTT CTGCCCAAGG CTGCGTCTAT
TGGCTCGATC CACAAGATGG CGAGCAGATC CTCGACCTCT GCGCTGCACC TGGAGGAAAA
ACGACGCATA TTTTAGAAGC TGCGCCACAA TCTCACGTAC TAGCTGTCGA TATTGATGAA
ACCCGTTTAG GTCGAGTAAA AGAAAATTTA CTTCGATTAC AAATGCATGC AGAAGTGAAA
CAGGGCGATG GACGTTACCC CGATTCATGG TGTGAAGGGC GTATGTTTGA CCGTATTCTG
TTGGATGCCC CTTGTTCCGC CACAGGCGTG ATTCGTCGTC ATCCAGATAT TAAATGGTTA
CGCCGGGACA GAGATATCGA GGAACTGGTT GCTCTGCAAA AAGAGATTTT TGACGCCATC
TGGCCACATC TCAAAGTAGG CGGAACGATG GTTTACGCGA CTTGCTCCAT TCTGCCACAA
GAAAACGCTC AACAAGTTAC GGATTTCCTG ACTCGCCATG CCGATGCAAC ACTGGTTGAT
ACGGGAACAC GCGAACTGCC AGGCATACAG ATGCTACCTC ATGCTGATGG TGGCGATGGT
TTCTTTTATG CGAAGCTGGT AAAAAACTGA
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| Protein sequence | MKSSYNLRSI AAKVVGQVLD QGQSLSALLP VHQREVSEKD RALLQELCFG VLRVLPQLEW
CIQQLMAKPL TGKQRTLHYL IMVGIYQLHY TRIPPHAALA ETVEGAVALK RPQLKGLING
VLRQFQRQQE ELIQREANHS SHYLHPSWLL ARIEHAYPNH WQTIVEANNQ RPPMWLRVNR
LHHTREAYLN LLAQEGIEAF PHTEFTDAIR LASPCAVDQL PGFSQGWATV QDASAQGCVY
WLDPQDGEQI LDLCAAPGGK TTHILEAAPQ SHVLAVDIDE TRLGRVKENL LRLQMHAEVK
QGDGRYPDSW CEGRMFDRIL LDAPCSATGV IRRHPDIKWL RRDRDIEELV ALQKEIFDAI
WPHLKVGGTM VYATCSILPQ ENAQQVTDFL TRHADATLVD TGTRELPGIQ MLPHADGGDG
FFYAKLVKN
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