Gene PC1_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3787 
Symbol 
ID8134774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4287386 
End bp4287859 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content45% 
IMG OID644867094 
Producthypothetical protein 
Protein accessionYP_003019338 
Protein GI253690148 
COG category[S] Function unknown 
COG ID[COG2922] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00193102 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGACG TACTCATGTA CTTGTTTGAG AGCTACATCC ACAATGAAAC TGAAATGCGT 
GTCGATCAGG ATACGTTAAC TGATGACCTC ACCCGCGCTG GATTTGATCG TAACGATATC 
TATAGCGCGT TGAGTTGGCT GGAAAAATTA GCCGATATTC AGGAAGGGCA GACTGCACCG 
CTTTATTTGG CGAACGATCC TCTGGCTATG CGGATCTACA CGCAGGATGA AACGTTGCGT 
CTTGATGCGG AATGTCGTGG CTTTTTATTG TTCCTTGAGC AAATTCAGGT TCTGAATCTT 
GAAACGCGCG AGATGGTTAT CGAACGCGTC ATGGCATTGG AAACGCAGGA ATTTGATCTG 
GAAGATCTTA AGTGGGTCAT TCTCATGGTG CTTTTCAATG TGCCTGGCTG TGAGAATGCC 
TATCAGCAAA TGGAAGAATT ACTCTTTGAG GTCAATGACG GTTATGTGCA ATAG
 
Protein sequence
MFDVLMYLFE SYIHNETEMR VDQDTLTDDL TRAGFDRNDI YSALSWLEKL ADIQEGQTAP 
LYLANDPLAM RIYTQDETLR LDAECRGFLL FLEQIQVLNL ETREMVIERV MALETQEFDL 
EDLKWVILMV LFNVPGCENA YQQMEELLFE VNDGYVQ