| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3784 |
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| Symbol | aroE |
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| ID | 8134771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4285399 |
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| End bp | 4286226 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644867091 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003019335 |
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| Protein GI | 253690145 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000719849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTCTGAAG TAACGTCTTT TGCAGTTTTT GGCAATCCGA TTGCGCATAG TAAATCACCT
CGCATACATG AGCTATTTGC TGCACAGACG GGGATAACGT TAACGTACGA GCGCGTTTTA
GCGCCTTTGG ATGATTTTGA GCAAGTGCTG CGTCAGTATT TTCTCAATTG TGCTGGTGGT
GCGAATGTCA CTGCGCCCTT TAAAGAGCGT GCCTTTGCCG AATCTGATGA GCGTAGCGAA
TGCGCGGCGC TTGCAGGGGC GGTTAATACA TTGAAGAGAC TGAGTGACGG GCGCCTGTTT
GGTGATAATA CAGATGGCAT TGGTTTACTT AGCGATCTGC AACGATTGGC GCTGGTGAAG
CCGTTGGATC GTGTGTTGCT GGTGGGGGCT GGCGGCGCGG CGCGTGGGGT TATCCAACCC
TTACTGGCTT ATGGCTGTAC GGTTGTGCTG ACTAATAGGA CGTTTTCCAA GGCTGATGAA
TTGGTTAAGG TCTTCAGTGG TATTGGGGAT ATTCATGCTG TTTCCCTCGA CGATTTGCAT
GGTCTGTCAT TCGATCTGAT CATTAACGCG ACATCTTCTG GGATGTACGA CAGTATTCCT
AATTTACCGC CAGAACTCAT TTCACCGGAA ACAGGCTGTT ATGACATGTT CTATCTACCG
CAACTGACAC CTTTTTTGTC ATGGTGCGTA CAGCATGGTG CTATCCGTTA TGCCGATGGC
TTGGGAATGT TGGTGGGGCA AGCGGCACAT GCGTTTAAGC TTTGGCATGG GGTGATGCCA
GATGTAGAAC CAGTAATTGC TTTGCTAAAG CAGGATCTTG CTACGTGA
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| Protein sequence | MSEVTSFAVF GNPIAHSKSP RIHELFAAQT GITLTYERVL APLDDFEQVL RQYFLNCAGG
ANVTAPFKER AFAESDERSE CAALAGAVNT LKRLSDGRLF GDNTDGIGLL SDLQRLALVK
PLDRVLLVGA GGAARGVIQP LLAYGCTVVL TNRTFSKADE LVKVFSGIGD IHAVSLDDLH
GLSFDLIINA TSSGMYDSIP NLPPELISPE TGCYDMFYLP QLTPFLSWCV QHGAIRYADG
LGMLVGQAAH AFKLWHGVMP DVEPVIALLK QDLAT
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