| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3775 |
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| Symbol | metH |
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| ID | 8134758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4267352 |
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| End bp | 4271035 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867078 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_003019326 |
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| Protein GI | 253690136 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAATC GGGTAGACGA ATTGCGGCGT CAGTTGGCGC AACGCATCAT GGTGCTGGAT
GGTGGTATGG GAACCATGAT CCAGGGTTAT CGCCTGCAGG AAGCAGATTA TCGCGGGGAG
CGCTTTGCCG ACTGGCCGAG CGATGTGAAG GGAAATAACG ATCTGCTGGT ACTCACCAGG
CCGCAGGTGA TTAGCGAAAT CCATGATGCC TATCTGGAAG CCGGTGCCGA CATTCTCGAA
ACTAATACCT TCAACGCCAC CACGATTGCG ATGGCGGACT ATGACATGCA ATCGCTGTCG
GCGGAAATTA ATACCGTCGC CGCACAGCTC GCGCGTGCCA GCGCGGACAA ATGGACGGCG
TTAACGCCGG ATAAACCGCG TTATGTCGCG GGTGTCCTCG GCCCGACGAA CCGCACTGCC
TCGATCTCTC CCGATGTTAA CGATCCCGCG TTTCGCAACG TCAGTTTTGA TCAACTGGTG
GACGCGTATC GCGAATCGAC ACGCGCACTG ATCGCGGGCG GCGTCGATCT GATCATGATC
GAAACCATTT TCGATACCTT GAATGCTAAA GCGGCGAGCT TCGCGGTCGA AAGCGAATTT
GAGGCACTGG GGATCGTCCT GCCAGTAATG ATTTCCGGCA CGATCACGGA TGCGTCAGGA
CGTACGCTAT CCGGCCAGAC AACCGAAGCG TTTTACAACT CTCTACGCCA TTCTCGTCCG
CTCTCGTTCG GTTTGAACTG TGCGCTGGGG CCGGATGAGC TGCGCCAGTA TGTCGCTGAG
CTGTCACGTA TTTCAGAATG CTATGTGAGT GCGCACCCCA ACGCAGGGTT GCCTAACGCC
TTTGGGGAGT ACGATTTAGA TCCGGCCGAT ATGGCGAAAC ATATTGGCGA ATGGGCGCGA
TCCGGTTTTC TGAATATCGT CGGTGGTTGC TGCGGATCGA CTCCCGCGCA TATTGCCGCG
ATGGCGAAAG TGGTGGAAGG CGTGCCGCCG CGCAAGCTGC CGGAGATCCC GGTCGCCTGC
CGCTTATCCG GCCTGGAACC GCTGACTATC GATGCCAATA CCCTGTTTGT TAATGTGGGT
GAACGGACCA ACGTTACCGG TTCTGCGCGT TTTAAACGCC TGATTAAAGA AGAAAAATAC
AACGAAGCGC TGGATGTCGC CCGTCAGCAG GTGGAAAGCG GCGCGCAGAT CATCGATATC
AACATGGATG AAGGCATGCT GGATGCGGAA GCTGCGATGA TCCGTTTCCT GAACCTCATT
GCTGGCGAGC CGGATATTGC TCGTGTGCCG ATCATGATCG ATTCCTCAAA ATGGGATGTG
GTTGAGAAAG GGCTTAAATG CATTCAGGGC AAGGGGATTG TTAACTCGAT CTCCATGAAG
GAAGGCGTGG AGGCCTTTGT CCACCATGCC AAACTGGTGC GGCGCTATGG TGCCGCCGTG
GTGGTCATGG CCTTTGATGA AGTCGGTCAG GCAGATACTC GCGCACGTAA AATTGAAATC
TGTCGCCGGG CCTACCGCAT CCTGACGGAA GAAGTCGGTT TTCCACCGGA AGATATCATC
TTCGATCCGA ACATTTTCGC TGTGGCAACG GGGATCGACG AGCATAACAA CTACGCGGTG
GATTTCATTG AGGCCTGTGC AGACATCAAG GCGCAGCTGC CGCATGCGAT GATCTCCGGC
GGCGTGTCTA ACGTGTCGTT CTCATTCCGT GGCAACGATC TGGTGCGTGA AGCGATCCAC
GCTGTCTTCC TCTATCACGC GATCCGCAAC GGCATGGACA TGGGGATCGT GAATGCCGGG
CAATTGGCGA TCTATGACGA TCTCCCTGCG GAACTACGCG ATGCGGTGGA GGATGTGATC
CTGAACCGTC GCAGCGATGC CACCGAACGC ATGCTTGAGC TGGCGGAAAA ATATCGCGGT
AGCAAAACAG ACGATGAAGG CAGTAAAACG CAGGCGGAAT GGCGCGGCTG GGATGTGAAG
AAGCGTCTGG AATATTCGCT GGTGAAAGGC ATTACCGAAT TTATTGAGCT GGATACTGAA
GAAGCGCGTC AGCAGGCCGC ACGGCCGATA GAGGTCATTG AAGGCCCGTT GATGGATGGG
ATGAACGTTG TCGGCGACCT GTTCGGTGCA GGGAAAATGT TTTTGCCACA GGTAGTGAAA
TCTGCGCGTG TCATGAAGCA GGCGGTGGCC TACCTCGAAC CCTATATTGA AGCCAGTAAA
GCCAAAGGTA CGTCAGCCGG AAAGATCCTG CTGGCGACGG TAAAAGGCGA CGTTCACGAT
ATCGGTAAAA ACATCGTCGG TGTGGTGCTG CAATGTAACA ACTACGAGAT TATCGATCTG
GGCGTGATGG TGCCGACGGA TAAAATTCTG AAGACCGCGC GTGAAGAGAA GGTCGATATC
ATCGGGCTGT CTGGGCTGAT TACGCCGTCG CTGGATGAAA TGGTCAATGT GGCGAAGGAG
ATGGAGCGTC AGGGCTTTAC GCTGCCGCTG CTGATTGGTG GCGCGACGAC CTCTAAAGCG
CACACCGCCG TGAAGATTGA ACAAAACTAT AGCGGCCCAA CTGTCTACGT ACAGAATGCG
TCCCGCTCTG TCGGTGTGGT GTCGGCGCTG CTGTCCAGTA CGCAACATGA CGACTTTGTG
GCGCGTACCC GTAAAGAGTA CGAAACCGTG CGTATTCAGC ACGCGCGTAA AAAGCCGAGA
ACGCCGCCGG TGACGCTGGA AGCGGCGCGT GCTAATGCCT CTGATCTGGA TTGGGAAAGT
TACACGCCGC CGGTTGCGCA TCGTCTGGGC GTTCAGGAAG TGACCGCCAG CATTGAAACG
CTGCGCAACT ACATCGACTG GACGCCGTTC TTTATGACCT GGTCGCTGGC GGGGAAATAT
CCCCGCATTC TGGAAGATGA GGTGGTGGGA GAAGAAGCCA AGCGCCTGTT CGCCGATGCC
AATGCGATGT TGGATGACTT ATCCGCACGC GGGGCGCTGA ATCCTCGTGG GGTGGTGGGA
TTATTCCCGG CGAACCGCGT TGGGGATGAC GTGGTGATTT ATACCGATGA ACGGCGCGAA
ACGGTGCTGT CAGTCAGTCA CCATCTGCGC CAACAGACGG AGAAAACCGA TTTTCCGAAC
TACTGTCTAT CCGACTTCGT GGCGCCGAAG TCCAGCGGTA AACCGGATTA TCTCGGTGCC
TTCGCGGTGA CCGGCGGGCT GGAAGAAGAT ACGCTGGCAG ACCAGTGGGA AGCCCTGCAT
GATGATTACA ATAAGATCAT GGTGAAGGCG ATCTCTGACC GTCTGGCAGA AGCCTTTGCA
GAATACCTGC ATGAGCGTGT GCGTAAGGTC TACTGGGGCT ATGCGCCGAA TGAGAACCTC
AGTAATGAGC TGCTGATTCG GGAAAACTAT CAGGGGATTC GCCCTGCGCC GGGCTATCCG
GCTTGCCCAG ACCACACGGA GAAAGTGCAA ATCTGGCAGC TGTTGGATGT GGAAAAGCAT
ACTGGCATGA AGCTCACCGA GTCTTATGCC ATGTGGCCGG GCGCATCGGT ATCCGGTTGG
TACTTCAGCC ACCCCGACAG CAAATACTTC GCCGTCGCGC AAATCCAACA CGATCAGGTC
GAGGATTACG CGGTGCGCAA AGGTATGGAA GTAAGTGACG TTGAGCGCTG GTTAGCGCCG
AATCTAGGTT ATGATGCGGA TTAA
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| Protein sequence | MSNRVDELRR QLAQRIMVLD GGMGTMIQGY RLQEADYRGE RFADWPSDVK GNNDLLVLTR
PQVISEIHDA YLEAGADILE TNTFNATTIA MADYDMQSLS AEINTVAAQL ARASADKWTA
LTPDKPRYVA GVLGPTNRTA SISPDVNDPA FRNVSFDQLV DAYRESTRAL IAGGVDLIMI
ETIFDTLNAK AASFAVESEF EALGIVLPVM ISGTITDASG RTLSGQTTEA FYNSLRHSRP
LSFGLNCALG PDELRQYVAE LSRISECYVS AHPNAGLPNA FGEYDLDPAD MAKHIGEWAR
SGFLNIVGGC CGSTPAHIAA MAKVVEGVPP RKLPEIPVAC RLSGLEPLTI DANTLFVNVG
ERTNVTGSAR FKRLIKEEKY NEALDVARQQ VESGAQIIDI NMDEGMLDAE AAMIRFLNLI
AGEPDIARVP IMIDSSKWDV VEKGLKCIQG KGIVNSISMK EGVEAFVHHA KLVRRYGAAV
VVMAFDEVGQ ADTRARKIEI CRRAYRILTE EVGFPPEDII FDPNIFAVAT GIDEHNNYAV
DFIEACADIK AQLPHAMISG GVSNVSFSFR GNDLVREAIH AVFLYHAIRN GMDMGIVNAG
QLAIYDDLPA ELRDAVEDVI LNRRSDATER MLELAEKYRG SKTDDEGSKT QAEWRGWDVK
KRLEYSLVKG ITEFIELDTE EARQQAARPI EVIEGPLMDG MNVVGDLFGA GKMFLPQVVK
SARVMKQAVA YLEPYIEASK AKGTSAGKIL LATVKGDVHD IGKNIVGVVL QCNNYEIIDL
GVMVPTDKIL KTAREEKVDI IGLSGLITPS LDEMVNVAKE MERQGFTLPL LIGGATTSKA
HTAVKIEQNY SGPTVYVQNA SRSVGVVSAL LSSTQHDDFV ARTRKEYETV RIQHARKKPR
TPPVTLEAAR ANASDLDWES YTPPVAHRLG VQEVTASIET LRNYIDWTPF FMTWSLAGKY
PRILEDEVVG EEAKRLFADA NAMLDDLSAR GALNPRGVVG LFPANRVGDD VVIYTDERRE
TVLSVSHHLR QQTEKTDFPN YCLSDFVAPK SSGKPDYLGA FAVTGGLEED TLADQWEALH
DDYNKIMVKA ISDRLAEAFA EYLHERVRKV YWGYAPNENL SNELLIRENY QGIRPAPGYP
ACPDHTEKVQ IWQLLDVEKH TGMKLTESYA MWPGASVSGW YFSHPDSKYF AVAQIQHDQV
EDYAVRKGME VSDVERWLAP NLGYDAD
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