Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3759 |
Symbol | |
ID | 8134742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4250021 |
End bp | 4250758 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644867062 |
Product | fumarate reductase iron-sulfur subunit |
Protein accession | YP_003019310 |
Protein GI | 253690120 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGA CGATCAAAAC CCTGAAAATG GAAGTCATGC GCTATAACCC TGAACAGGAT CGCGAACCCT ATTTTGAAGC GTTCGACGTC CCGTACAACA CGCAGACTTC CCTGCTGGAT GCGCTGGGTT ATATCAAAGA TAACCTGGCA CCGGACCTCT CCTACCGCTG GTCCTGCCGT ATGGCAATCT GTGGCTCCTG CGGCATGATG GTGAATAATG TCCCTAAATT GGCCTGCAAA ACCTTTCTGC GTGATTACAC GAACGGTCTG AAGGTCGAAG CATTGGGTAA TTTCCCCATT GAGCGCGATT TAGTGGTCGA TATGACCCAC TTCATCGAGA GCCTGGAAGC CATCAAGCCG TATATCATCG GCAACGATCG TAAACCTGCT GACGGCCCGA ACAAGCAGAC CCCGGCGCAA ATGGCGAAGT ATCACCAGTT CTCCGGCTGT ATTAACTGTG GTTTGTGCTA CGCGGCCTGT CCGCAGTTTG GCCTGAACCC TGAGTTCATC GGCCCGGCGG CGATTACGCT GGCACACCGT TATAACCTGG ACAACCGCGA TCACGGCAAG AAAGAACGTA TGCCGCAGTT GAACGGTAAT AATGGCGTCT GGTCCTGTAC GTTTGTGGGC TACTGCTCAG AAGTGTGTCC GAAGCACGTC GACCCTGCCG CTGCGATCCA GCAAGGTAAA GTCGAAAGCG CGAAAGACTT CATGATCGCC ATGCTGAAAC CACAATAA
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Protein sequence | MAETIKTLKM EVMRYNPEQD REPYFEAFDV PYNTQTSLLD ALGYIKDNLA PDLSYRWSCR MAICGSCGMM VNNVPKLACK TFLRDYTNGL KVEALGNFPI ERDLVVDMTH FIESLEAIKP YIIGNDRKPA DGPNKQTPAQ MAKYHQFSGC INCGLCYAAC PQFGLNPEFI GPAAITLAHR YNLDNRDHGK KERMPQLNGN NGVWSCTFVG YCSEVCPKHV DPAAAIQQGK VESAKDFMIA MLKPQ
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