Gene PC1_3759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3759 
Symbol 
ID8134742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4250021 
End bp4250758 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content53% 
IMG OID644867062 
Productfumarate reductase iron-sulfur subunit 
Protein accessionYP_003019310 
Protein GI253690120 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGA CGATCAAAAC CCTGAAAATG GAAGTCATGC GCTATAACCC TGAACAGGAT 
CGCGAACCCT ATTTTGAAGC GTTCGACGTC CCGTACAACA CGCAGACTTC CCTGCTGGAT
GCGCTGGGTT ATATCAAAGA TAACCTGGCA CCGGACCTCT CCTACCGCTG GTCCTGCCGT
ATGGCAATCT GTGGCTCCTG CGGCATGATG GTGAATAATG TCCCTAAATT GGCCTGCAAA
ACCTTTCTGC GTGATTACAC GAACGGTCTG AAGGTCGAAG CATTGGGTAA TTTCCCCATT
GAGCGCGATT TAGTGGTCGA TATGACCCAC TTCATCGAGA GCCTGGAAGC CATCAAGCCG
TATATCATCG GCAACGATCG TAAACCTGCT GACGGCCCGA ACAAGCAGAC CCCGGCGCAA
ATGGCGAAGT ATCACCAGTT CTCCGGCTGT ATTAACTGTG GTTTGTGCTA CGCGGCCTGT
CCGCAGTTTG GCCTGAACCC TGAGTTCATC GGCCCGGCGG CGATTACGCT GGCACACCGT
TATAACCTGG ACAACCGCGA TCACGGCAAG AAAGAACGTA TGCCGCAGTT GAACGGTAAT
AATGGCGTCT GGTCCTGTAC GTTTGTGGGC TACTGCTCAG AAGTGTGTCC GAAGCACGTC
GACCCTGCCG CTGCGATCCA GCAAGGTAAA GTCGAAAGCG CGAAAGACTT CATGATCGCC
ATGCTGAAAC CACAATAA
 
Protein sequence
MAETIKTLKM EVMRYNPEQD REPYFEAFDV PYNTQTSLLD ALGYIKDNLA PDLSYRWSCR 
MAICGSCGMM VNNVPKLACK TFLRDYTNGL KVEALGNFPI ERDLVVDMTH FIESLEAIKP
YIIGNDRKPA DGPNKQTPAQ MAKYHQFSGC INCGLCYAAC PQFGLNPEFI GPAAITLAHR
YNLDNRDHGK KERMPQLNGN NGVWSCTFVG YCSEVCPKHV DPAAAIQQGK VESAKDFMIA
MLKPQ