Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3755 |
Symbol | psd |
ID | 8134738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4242321 |
End bp | 4243349 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644867058 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_003019306 |
Protein GI | 253690116 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGGATA ATATCAAAAT CAAACTACAG TATTGGCTTC CCAAGATCTG GCTGACCCGC TTAGCGGGCT GGGGAGCAAA TAAGCGTGCG GGAAAACTCA CCAAGCTGGT GATCGATCTG TTTGTCCGCC AATACAACGT CAACATGCAG GAAGCGCAGC AGTCAGATAC CGCATCCTAT CGCACGTTTA ACGAGTTTTT CGTTCGCCCT CTGCGCCCAG GCGTTCGGCC TGTCGATCCT CATGCCCACC GTCTGGTGCA ACCTGCTGAC GGCGTGCTGT CGCAATTTGG TCCCATAACC GATGGCAAGC TGATTCAGGC GAAGCAGCAC GACTACACGC TGGAAGCGCT GCTGGCCGGC AACTATATGA TGGCCGATCT GTTCCGCGAC GGCCTGTTTG CCACCATTTA TCTTTCACCG CGCGATTATC ACCGTCTCCA CATGCCGTGC GACGGCGTGC TGCGCGAGAT GATTTACGTG CCAGGCGACC TGTTCTCCGT CAATCTGCTG ACGGCCGATA ACGTGCCGAA TCTGTTTGCG CGTAACGAAC GCGTCATTTG TCTGTTTGAT ACGGAATTCG GCCCATTGGC ACAAATTCTG GTCGGTGCAA CCATTGTCGG CAGCATCGAA ACCGTGTGGT CAGGCGTGGT GACGCCACCG CGCGAAGGCA TCATCAAGCG CTGGACTTAC CCGCAGGCGG GTGAAGAAGG TGCAGTCGTG CTGGCGAAAG GCGAGGAAAT GGGTCGCTTC AAGCTGGGCT CAACCGTGAT TAACCTGTTT GCCGCAGGCA ATAATCTCCA GTTTGCCGCC CACCTAAATA ACATGAGTGT GACCCGTATG GGTGAACCGT TTGCCGAAGT TCGTCAGGAT GATCCAACGC CTGTCGTCTT CCCGGAAGGA ACCGAGCTGG CAGCCAACGA CGCCGCACCG TCGCCTGTCG CAGCAGCGTC TGAACCTGTT CAGACTGAGG AACAAAATAC TGCGTCTGAC GCAACTGGCC AGACGGGTCA CAAACCCGAC GCGCCGTAA
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Protein sequence | MLDNIKIKLQ YWLPKIWLTR LAGWGANKRA GKLTKLVIDL FVRQYNVNMQ EAQQSDTASY RTFNEFFVRP LRPGVRPVDP HAHRLVQPAD GVLSQFGPIT DGKLIQAKQH DYTLEALLAG NYMMADLFRD GLFATIYLSP RDYHRLHMPC DGVLREMIYV PGDLFSVNLL TADNVPNLFA RNERVICLFD TEFGPLAQIL VGATIVGSIE TVWSGVVTPP REGIIKRWTY PQAGEEGAVV LAKGEEMGRF KLGSTVINLF AAGNNLQFAA HLNNMSVTRM GEPFAEVRQD DPTPVVFPEG TELAANDAAP SPVAAASEPV QTEEQNTASD ATGQTGHKPD AP
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