Gene PC1_3755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3755 
Symbolpsd 
ID8134738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4242321 
End bp4243349 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content56% 
IMG OID644867058 
Productphosphatidylserine decarboxylase 
Protein accessionYP_003019306 
Protein GI253690116 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00163] phosphatidylserine decarboxylase precursor 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGATA ATATCAAAAT CAAACTACAG TATTGGCTTC CCAAGATCTG GCTGACCCGC 
TTAGCGGGCT GGGGAGCAAA TAAGCGTGCG GGAAAACTCA CCAAGCTGGT GATCGATCTG
TTTGTCCGCC AATACAACGT CAACATGCAG GAAGCGCAGC AGTCAGATAC CGCATCCTAT
CGCACGTTTA ACGAGTTTTT CGTTCGCCCT CTGCGCCCAG GCGTTCGGCC TGTCGATCCT
CATGCCCACC GTCTGGTGCA ACCTGCTGAC GGCGTGCTGT CGCAATTTGG TCCCATAACC
GATGGCAAGC TGATTCAGGC GAAGCAGCAC GACTACACGC TGGAAGCGCT GCTGGCCGGC
AACTATATGA TGGCCGATCT GTTCCGCGAC GGCCTGTTTG CCACCATTTA TCTTTCACCG
CGCGATTATC ACCGTCTCCA CATGCCGTGC GACGGCGTGC TGCGCGAGAT GATTTACGTG
CCAGGCGACC TGTTCTCCGT CAATCTGCTG ACGGCCGATA ACGTGCCGAA TCTGTTTGCG
CGTAACGAAC GCGTCATTTG TCTGTTTGAT ACGGAATTCG GCCCATTGGC ACAAATTCTG
GTCGGTGCAA CCATTGTCGG CAGCATCGAA ACCGTGTGGT CAGGCGTGGT GACGCCACCG
CGCGAAGGCA TCATCAAGCG CTGGACTTAC CCGCAGGCGG GTGAAGAAGG TGCAGTCGTG
CTGGCGAAAG GCGAGGAAAT GGGTCGCTTC AAGCTGGGCT CAACCGTGAT TAACCTGTTT
GCCGCAGGCA ATAATCTCCA GTTTGCCGCC CACCTAAATA ACATGAGTGT GACCCGTATG
GGTGAACCGT TTGCCGAAGT TCGTCAGGAT GATCCAACGC CTGTCGTCTT CCCGGAAGGA
ACCGAGCTGG CAGCCAACGA CGCCGCACCG TCGCCTGTCG CAGCAGCGTC TGAACCTGTT
CAGACTGAGG AACAAAATAC TGCGTCTGAC GCAACTGGCC AGACGGGTCA CAAACCCGAC
GCGCCGTAA
 
Protein sequence
MLDNIKIKLQ YWLPKIWLTR LAGWGANKRA GKLTKLVIDL FVRQYNVNMQ EAQQSDTASY 
RTFNEFFVRP LRPGVRPVDP HAHRLVQPAD GVLSQFGPIT DGKLIQAKQH DYTLEALLAG
NYMMADLFRD GLFATIYLSP RDYHRLHMPC DGVLREMIYV PGDLFSVNLL TADNVPNLFA
RNERVICLFD TEFGPLAQIL VGATIVGSIE TVWSGVVTPP REGIIKRWTY PQAGEEGAVV
LAKGEEMGRF KLGSTVINLF AAGNNLQFAA HLNNMSVTRM GEPFAEVRQD DPTPVVFPEG
TELAANDAAP SPVAAASEPV QTEEQNTASD ATGQTGHKPD AP