| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3715 |
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| Symbol | |
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| ID | 8134695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4192937 |
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| End bp | 4194322 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867015 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_003019266 |
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| Protein GI | 253690076 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.447839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTATTC ATATTTTAGG TATCTGTGGC ACCTTTATGG GTGGCCTTGC CCTGCTTGCT
CGTTCACTGG GGCATGACGT CACGGGCTCA GATGCAAATG TTTATCCTCC CATGAGTACC
TTACTTGAAG AGCAGGGAAT CACGCTGATT CAGGGCTACG ATCCAGCGCA GCTTACCCCC
GCCCCTGATT TGGTCATCAT CGGCAATGCG ATGACGCGTG GAAACCCGTG CGTCGAAGCC
GTACTGGAAC AAGGATTACC TTATGTTTCC GGCCCACAGT GGCTGCATGA TCATGTACTA
CGCGATCGCT GGGTGATTGC CGTTGCGGGT ACTCATGGCA AAACCACCAC GGCGGGGATG
GTCACCTGGA TTCTGGAAGA TTGTGGCTAT CAGCCCGGGT TTGTGATCGG TGGCGTTCCC
GGCAACTTTA CCGTTTCAGC ACGGTTGGGT GACAGCCCAT TCATGGTGCT CGAAGCCGAT
GAATACGATT GTGCGTTCTT CGACAAACGT TCCAAATTCG TACATTACTG CCCCAGAACA
CTGGTGCTCA ACAACCTTGA GTTCGATCAC GCCGACATCT TTGACGATCT GAAAGCCATT
CAGAAACAGT TCCACCATCT TGTGCGACTA GTGCCCGGCA GCGGAAAGAT CATTCTGCCA
ACCAACGACC TTAACCTCAA ACAGGTGATG GGAATGGGAT GCTGGAGCGA GCAGGAACTG
GTTGGCGAAG AAGGCACATG GCGTGCACAG AAAGTGTCGA TTGATGCCAG CCAATATCAG
GTTTACCTGA ACAATGAACT CGTCGGTGAA GTCCATTGGA AGCTGGTGGG CGAACACAAT
ATGCACAACG GGCTGATGGC CATTGCCGCT GCACATCATG TCGGTGTGCT GCCCGCAGAT
GCCTGCCGCG CGCTGGGCGG ATTTATCAAC GCACGTCGTC GCCTTGAATT ACGCGGTACG
GAACATGGCG TCACGGTGTA TGACGATTTT GCACATCACC CGACTGCGAT TCTGGCGACT
CTGTCGGCAC TACGCAGTAA GGTTGGCGGC ACGGCGCGTA TTTTGGCCGT ACTTGAACCT
CGTTCAAACA CCATGAAATT GGGAATGTGC AAAAATGAGC TGGCGCCGTC ATTAGGCCGC
GCCGATGAAG TTTTCCTCTT CCAGCCAGCC CATATTCCGT GGCAGGTCGT CGAAGTCGCG
GAAGCCTGCG TACAGCCTGC TCATTGGAGC GCGGATATCG ATACGCTGGT AGAAAACATC
GTCAAGACCG CACAACCAGG CGACCATATT CTTGTAATGA GCAACGGCGG ATTTAGCAAC
ATCCACAACA AGCTGTTAGA TGGTATGAAG AAAAAAGCGC AGAAGATGAA AGACGCTCAG
GAATAA
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| Protein sequence | MRIHILGICG TFMGGLALLA RSLGHDVTGS DANVYPPMST LLEEQGITLI QGYDPAQLTP
APDLVIIGNA MTRGNPCVEA VLEQGLPYVS GPQWLHDHVL RDRWVIAVAG THGKTTTAGM
VTWILEDCGY QPGFVIGGVP GNFTVSARLG DSPFMVLEAD EYDCAFFDKR SKFVHYCPRT
LVLNNLEFDH ADIFDDLKAI QKQFHHLVRL VPGSGKIILP TNDLNLKQVM GMGCWSEQEL
VGEEGTWRAQ KVSIDASQYQ VYLNNELVGE VHWKLVGEHN MHNGLMAIAA AHHVGVLPAD
ACRALGGFIN ARRRLELRGT EHGVTVYDDF AHHPTAILAT LSALRSKVGG TARILAVLEP
RSNTMKLGMC KNELAPSLGR ADEVFLFQPA HIPWQVVEVA EACVQPAHWS ADIDTLVENI
VKTAQPGDHI LVMSNGGFSN IHNKLLDGMK KKAQKMKDAQ E
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