Gene PC1_3683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3683 
Symbol 
ID8134663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4157687 
End bp4158346 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content53% 
IMG OID644866983 
Productribose-5-phosphate isomerase A 
Protein accessionYP_003019234 
Protein GI253690044 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAG ATGAACTGAA AAAAGCAGTG GGATGGGCAG CGCTAGACTA TGTCCGCCCG 
GACACCATTG TGGGAGTAGG AACCGGATCG ACGGCGGCAC ATTTTATTGA TGCGCTGGGT 
TCGATAAAAC ACCAAATCAA AGGCGCGGTC TCCAGCTCGG ATGCCTCAAC GGAAAAACTG 
AAAAGTCTGG GTATCCCCGT CTTTGACGCC AATGAAGTCG ATTCGCTGGA TGTTTACGTC 
GATGGTGCCG ATGAGATCAA CGGACATATG CAGATGATTA AAGGCGGCGG TGCGGCACTG 
ACCCGCGAGA AAATCATTTC GGCGCTGTCG CGTCAGTTCA TCTGCATTGT TGATGCCTCT 
AAGCAGGTTG ATGTGCTAGG TAAATTCCCG CTGCCGGTTG AAGTTATTCC GATGGCGCGG 
TCTTACGTCG CGCGTGAACT GGTGAAGCTA GGCGGGCAGC CGGTCTATCG TCAGGGCGTC 
GTGACGGATA ACGGCAACGT CATTCTGGAT GTACACAACC TGAATATCAT GGATGCGATC 
GCGGTAGAAA ATCACATCAA TGGTATCCCA GGCGTGGTGA CCGTTGGGCT GTTTGCCAAC 
CGCGGTGCGG ATGTCGCGTT AGTCGGCACG TCTGAGGGTG TAAAAACCGT CGTTAAATGA
 
Protein sequence
MTQDELKKAV GWAALDYVRP DTIVGVGTGS TAAHFIDALG SIKHQIKGAV SSSDASTEKL 
KSLGIPVFDA NEVDSLDVYV DGADEINGHM QMIKGGGAAL TREKIISALS RQFICIVDAS 
KQVDVLGKFP LPVEVIPMAR SYVARELVKL GGQPVYRQGV VTDNGNVILD VHNLNIMDAI 
AVENHINGIP GVVTVGLFAN RGADVALVGT SEGVKTVVK