Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3660 |
Symbol | |
ID | 8134640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4131090 |
End bp | 4131665 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644866960 |
Product | hypothetical protein |
Protein accession | YP_003019211 |
Protein GI | 253690021 |
COG category | [S] Function unknown |
COG ID | [COG1584] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.444217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACGA ACACGTTGGC AAATCCTGGT CCATTAGGAC TGATGGGCTT CGGGATGACC ACTATTCTGT TGAACCTGCA CAACGCAGGC TTTTTCCCAC TTTCTTCCAT CATTCTCAGC ATGGGTATTT TCTACGGCGG TATCGCCCAG ATTCTGGCTG GTCTGCTGGA ATATAAAAAA GGCAATACGT TTGGCGTGAC CGCATTCACG TCTTATGGCG CATTCTGGCT GACGCTGGTT GCCATTCTTA TGCTGCCGAA AATGGGTCTG GCGGAAGCCA GCGATGCCCA GTTCCTTGGC GTCTTCCTTG GCCTATGGGG CATCTTCACG CTGTTTATGT TCTTCGGTAC ATTCGGCACC AACCGCGCAC TGCAATTTGT CTTCGGTAGC CTGACCGTGC TGTTTGCTCT GCTGGCCGTA GGTAACTTCA CCGGCAACCA TGCCCTGCTG ACCTTCGCGG GCTATGAAGG CATCATCTGT GGCGCTAGCG CGATTTATCT GGCCATGGCT GAAGTGCTGA ACGAGAAGTT TGGCCGCAGC GTCCTGCCAA TCGGTTCATG TGGCGCGTCT CACTAA
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Protein sequence | MSTNTLANPG PLGLMGFGMT TILLNLHNAG FFPLSSIILS MGIFYGGIAQ ILAGLLEYKK GNTFGVTAFT SYGAFWLTLV AILMLPKMGL AEASDAQFLG VFLGLWGIFT LFMFFGTFGT NRALQFVFGS LTVLFALLAV GNFTGNHALL TFAGYEGIIC GASAIYLAMA EVLNEKFGRS VLPIGSCGAS H
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