Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3655 |
Symbol | rpsT |
ID | 8134635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4124678 |
End bp | 4124941 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644866955 |
Product | 30S ribosomal protein S20 |
Protein accession | YP_003019206 |
Protein GI | 253690016 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0268] Ribosomal protein S20 |
TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.225514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTAATA TCAAATCAGC TAAGAAACGC GCCGTACAAT CTGAGAAGCG CCGTAAGCAT AACGCAAGCC GTCGCTCAAT GATGCGTACT TTCATCAAGA AAGTATACGC GGCGATCGCT ACTGGCGATA AAGAAGTGGC ACAGAAAGCG TTTAATGACA TGCAACCGAT CGTGGATCGC CAGGCTGGTA AAGGTCTGAT TCACAAGAAC AAAGCTGCAC GTCATAAATC CAATCTGGTT GCGCGCATCA ACGCCATGCA ATAA
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Protein sequence | MANIKSAKKR AVQSEKRRKH NASRRSMMRT FIKKVYAAIA TGDKEVAQKA FNDMQPIVDR QAGKGLIHKN KAARHKSNLV ARINAMQ
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