Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3643 |
Symbol | |
ID | 8134623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4109553 |
End bp | 4110374 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644866943 |
Product | hypothetical protein |
Protein accession | YP_003019194 |
Protein GI | 253690004 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAGTG AATGTGAGAA CCGTGAATTA CTAAGTAATA CAAAACGGAT GGGTGAAGCG CCGCAGCAGC GGGAAATAAC CCGCTTGTGC ATCCAGTGCG CGCTACTGCT GTTACAACAT GGCGCGGAGA GTATGGTCGT GGAACAACTA TCATCACGGT TGGGCATGGC GCTCGGCGCT GATAGCGTAG AAAGTTCAAT CTCGGCCAAT TCCATTGTCC TGACCACCAT CATGCAAGGG CATTGCCTGA CGTCGACGCG GAAGAATGTG GACCGCGGCA TTAATATGCA CGTCGTCATT GAGGTGCAGC ATGCGGTCAT CATGGCCGAG CATAAACTGC TGGATGTAGC GGGTGTGGAA AAGCGTCTGG GGAATATCAA ACCCTTGCGC TACCCGCGCT GGCTGATGGT TACCGTTGTG GCGCTTTCCT GCGGCTGCTT CAGCCGTTTG AACGGCGGCG GGTGGGATGC GTTTATCGTC ACGCTGATTG CCAGCGGCCT GGCGATGTAC GTCCGACAGG TCTTTACGGC ACGACACCTG AATCCGTTGA TCAACTTCTG TATTACGGCG TTTGTCGCGA CGTCGGCATC TGGCCTGTTG ATGCGTTTAC CTGCGTTTTC TCAAACCTCG ACGGTGGCGA TGGCTGCGAG CGTGCTGCTG CTGGTGCCGG GGTTCCCGTT GATTAACGCC GTGGCGGATA TGTTTAAAGG GCATGTGAAT ACCGGCCTGG CACGCTGGAC GGTCGCGAGT TTGCTGACGT TGGCAACCTG TATTGGTGTG GTGATGGCGA TGTCACTGTG GGGGTTACGC GGATGGGCTT AA
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Protein sequence | MVSECENREL LSNTKRMGEA PQQREITRLC IQCALLLLQH GAESMVVEQL SSRLGMALGA DSVESSISAN SIVLTTIMQG HCLTSTRKNV DRGINMHVVI EVQHAVIMAE HKLLDVAGVE KRLGNIKPLR YPRWLMVTVV ALSCGCFSRL NGGGWDAFIV TLIASGLAMY VRQVFTARHL NPLINFCITA FVATSASGLL MRLPAFSQTS TVAMAASVLL LVPGFPLINA VADMFKGHVN TGLARWTVAS LLTLATCIGV VMAMSLWGLR GWA
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