Gene PC1_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3643 
Symbol 
ID8134623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4109553 
End bp4110374 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content56% 
IMG OID644866943 
Producthypothetical protein 
Protein accessionYP_003019194 
Protein GI253690004 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGTG AATGTGAGAA CCGTGAATTA CTAAGTAATA CAAAACGGAT GGGTGAAGCG 
CCGCAGCAGC GGGAAATAAC CCGCTTGTGC ATCCAGTGCG CGCTACTGCT GTTACAACAT
GGCGCGGAGA GTATGGTCGT GGAACAACTA TCATCACGGT TGGGCATGGC GCTCGGCGCT
GATAGCGTAG AAAGTTCAAT CTCGGCCAAT TCCATTGTCC TGACCACCAT CATGCAAGGG
CATTGCCTGA CGTCGACGCG GAAGAATGTG GACCGCGGCA TTAATATGCA CGTCGTCATT
GAGGTGCAGC ATGCGGTCAT CATGGCCGAG CATAAACTGC TGGATGTAGC GGGTGTGGAA
AAGCGTCTGG GGAATATCAA ACCCTTGCGC TACCCGCGCT GGCTGATGGT TACCGTTGTG
GCGCTTTCCT GCGGCTGCTT CAGCCGTTTG AACGGCGGCG GGTGGGATGC GTTTATCGTC
ACGCTGATTG CCAGCGGCCT GGCGATGTAC GTCCGACAGG TCTTTACGGC ACGACACCTG
AATCCGTTGA TCAACTTCTG TATTACGGCG TTTGTCGCGA CGTCGGCATC TGGCCTGTTG
ATGCGTTTAC CTGCGTTTTC TCAAACCTCG ACGGTGGCGA TGGCTGCGAG CGTGCTGCTG
CTGGTGCCGG GGTTCCCGTT GATTAACGCC GTGGCGGATA TGTTTAAAGG GCATGTGAAT
ACCGGCCTGG CACGCTGGAC GGTCGCGAGT TTGCTGACGT TGGCAACCTG TATTGGTGTG
GTGATGGCGA TGTCACTGTG GGGGTTACGC GGATGGGCTT AA
 
Protein sequence
MVSECENREL LSNTKRMGEA PQQREITRLC IQCALLLLQH GAESMVVEQL SSRLGMALGA 
DSVESSISAN SIVLTTIMQG HCLTSTRKNV DRGINMHVVI EVQHAVIMAE HKLLDVAGVE
KRLGNIKPLR YPRWLMVTVV ALSCGCFSRL NGGGWDAFIV TLIASGLAMY VRQVFTARHL
NPLINFCITA FVATSASGLL MRLPAFSQTS TVAMAASVLL LVPGFPLINA VADMFKGHVN
TGLARWTVAS LLTLATCIGV VMAMSLWGLR GWA