| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3629 |
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| Symbol | |
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| ID | 8134609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4094851 |
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| End bp | 4097754 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866929 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_003019180 |
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| Protein GI | 253689990 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTTA CACTTGGTCA GCGCTGGATC AGCGATACGG AAAGCGAACT TGGACTGGGA
ACGGTTGTTG CCGTCGATAC GCGAATGATA ACGCTGCTTT TCCCTGCCAG CGGTGAAAAC
CGACTTTATT CCCGCAGCGA CGCCCCCATC ACCCGCGTGA TGTTCAACCC CGGCGATACC
GTCACCAGCC ATGAAGGCTG GCAGCTCAAA GTTGATGACG TGCGAGAAGA AAAAGGGTTG
CTGGTGTATT GCGGCCAACG TCTGGACGAT GAAACATCGG CGGAACTGCG TGAAGTCTTT
TTGGACAGCA AACTGACGTT CAATAAACCA CAAGACCGCC TGTTCGCCGG ACAGATCGAT
CGTATGGATC GCTTTGCCCT GCGCTATCGC GCCCGCAAGC ATCAGAACGA GCAGGCGCTG
CAACAATGGG GCGGTTTGCG CGGCATGCGT GCCAGCCTCA TCCCTCATCA GCTTCATATC
GCTCATGAAG TCGGCCAACG TCATGCGCCA CGTGTGTTGC TGGCGGACGA AGTCGGTCTG
GGGAAAACCA TTGAAGCCGG TATGATCATC CACCAGCAGT TGCTGGCGGG TCGTGCCAGC
CGCGTGCTGA TTATCGTACC GGAAACCCTG CAACATCAGT GGCTGGTCGA AATGCTGCGC
CGCTTTAACC TGCTGTTCTC GCTGTTTGAC GACGAGCGCT ATGCCGAAGC CAAGCTGGAT
AGTAGCAATC CGTTCGAAAC CGAACAGTTG GTGATTTGTT CACTGGGATT TGTGCAGCGT
AACGCCCAGC GTTTTGCACA GCTCGTCAAC GCCGATTGGG ATCTGCTGGT GGTGGATGAA
GCTCACCATC TGGTCTGGAG CGAAGAGAGT CCCAGCGCAG AATATCAGGC CGTTGAAACG
CTGGCACGCG CCACGCCAGC TGTTCTGCTG TTAACCGCAA CGCCGGAACA GCTTGGTCAG
CAGAGTCACT TTGCACGTTT ACGCCTGCTC GATCCCAACC GTTTCCACGA CTATCAGGAA
TTCCTTGCCG AGCAGCAGCA GTATCGCCCG GTCGCCGATG CCGTCACGTT GCTGTTAGCG
GGCGAGAAAG CCCAGACGGC TGAACTGAAT GCGCTGAGCG ATCTCTTGGG CGAGCAGGAC
ATCGAGCCGC TGCTGAAAGC CATCAATAGC GACAGCGATG ACAATCAGAA GGCGCGTCAG
GAACTGATCG CCATGCTGAT GGATCGCCAC GGCACCAGCC GCGTGTTGTT CCGTAACACG
CGTCAGGGGG TTAAAGGTTT CCCGCAGCGT ATCCTGCATC AAATCCGCCT GCCGCTGCCG
TCACAGTACC AAACGGCCAT TAAAGTATCC GGCATTATGA ACGCGAATAA GACGCTGGAA
GTCCGCGCCC GCGACATGCT GTACCCGGAA CAAATTTATC AACAGCTCGA AGGGGACGAT
GCCACCTGGT GGAACTTCGA CCCGCGCGTG GAATGGTTAC TGAACTACCT GACCGCCAAC
CGAGATGAAA AAGTGCTGGT GATCTGTGCG CAGGCCGCCA CGGCACTACA GCTGGAGCAA
GTGCTGCGCA CGCGTGAAGC GATCCGCGCC GCCGTCTTCC ATGAAGGACT GTCGATTCTG
GAGCGTGACC GCGCCGCCGC CTACTTTGCT TCCGAAGAAG AAGGCGCACA GGTGCTGATC
TGTTCAGAGA TCGGCTCCGA AGGCCGCAAC TTCCAGTTTG CCAGCCACTT AGTGATGTTC
GATCTGCCGT TCAACCCCGA TCTGCTGGAA CAGCGTATCG GCCGTCTGGA TCGTATCGGG
CAGGCAAAAG AAATTCAGAT TCTGGTGCCG TATCTGGAAA ATACCGCGCA GGCCATGCTG
GTGCGCTGGT ATCACGAAGG GTTGGATGCG TTTGAGCACA CCTGCCCGAC AGGCCGCACC
ATCTATGATG CGCACCACGC GCAGCTGATC GAGCGACTGA CGACCGTCGG TGAACAGCAA
GGACTGGATG AATTTATTCA CACCTGCCGC CAACAGCACG ACAACCTGAA ACAGCAACTT
GAACAAGGCC GCGATCGTCT GCTGGAAATG CATTCTAACG GTGGAGAACA GGCTCAGTTG
CTGGCGCAGG CCATCGCCGA GCAGGATAAT GACGTCAATC TGGTGACATT CGCGCTGAAC
CTGTTTGATA TTGTTGGCAT CAATCAGGAA GATCGCAGCG ATAACCTGAT CATCCTGACG
CCATCCGATC ATATGCTGGT GCCGGATTTC CCTGGTCTGC CGCAGGACGG TTGTACGATC
ACTTTCGATC GCGATCAGGC ACTTTCCCGC GAAGATGCGC AGTTTATCAG TTGGGAACAC
CCGCTCATCC GTAACGGACT CGATCTGGTG CTGTCCGGTG ATACCGGAAG CTGTGCAGTG
TCGCTGCTGA AAAATAAAGC CCTGCCGGTC GGTACGCTGC TGGCTGAACT GGTTTACGTT
GTAGAAGCAC AGGCGCCTAA ACACCTGCAG TTGACCCGCT TCCTGCCGCC AACGCCAGTT
CGCCTGCTCA TGGATCGTAA AGGGACTAAT CTGGCGGCAC AGGTTGAGTT TGAGAGCTTC
AATCGCCAGC TGAACGCGGT AAACCGGCAT ACGTCCAGCA AGCTGGTGAA TGCGGTACAA
GCAGACGTCC ACGCCATGCT ACAGCAGGCG GAAGCATTAG TTGAAGCGCA GGCACGCCAG
CTCATTACCG AAGCACAGGA GCAGGCTGAC CTGCAATTGC GCCGCGAGCT GGAACGTCTG
GAAGCGCTGA AAGCCGTCAA CCCTAACATT CGTGAAGATG AGCTGACCGC GCTGGAAAGC
CAGCGTGAGC AGGTGCTGAG TAACCTGCAC GAAGCCAACT GGCGTCTGGA TGCGATCCGT
CTGGTCGTGG TAACGCATCA GTAA
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| Protein sequence | MPFTLGQRWI SDTESELGLG TVVAVDTRMI TLLFPASGEN RLYSRSDAPI TRVMFNPGDT
VTSHEGWQLK VDDVREEKGL LVYCGQRLDD ETSAELREVF LDSKLTFNKP QDRLFAGQID
RMDRFALRYR ARKHQNEQAL QQWGGLRGMR ASLIPHQLHI AHEVGQRHAP RVLLADEVGL
GKTIEAGMII HQQLLAGRAS RVLIIVPETL QHQWLVEMLR RFNLLFSLFD DERYAEAKLD
SSNPFETEQL VICSLGFVQR NAQRFAQLVN ADWDLLVVDE AHHLVWSEES PSAEYQAVET
LARATPAVLL LTATPEQLGQ QSHFARLRLL DPNRFHDYQE FLAEQQQYRP VADAVTLLLA
GEKAQTAELN ALSDLLGEQD IEPLLKAINS DSDDNQKARQ ELIAMLMDRH GTSRVLFRNT
RQGVKGFPQR ILHQIRLPLP SQYQTAIKVS GIMNANKTLE VRARDMLYPE QIYQQLEGDD
ATWWNFDPRV EWLLNYLTAN RDEKVLVICA QAATALQLEQ VLRTREAIRA AVFHEGLSIL
ERDRAAAYFA SEEEGAQVLI CSEIGSEGRN FQFASHLVMF DLPFNPDLLE QRIGRLDRIG
QAKEIQILVP YLENTAQAML VRWYHEGLDA FEHTCPTGRT IYDAHHAQLI ERLTTVGEQQ
GLDEFIHTCR QQHDNLKQQL EQGRDRLLEM HSNGGEQAQL LAQAIAEQDN DVNLVTFALN
LFDIVGINQE DRSDNLIILT PSDHMLVPDF PGLPQDGCTI TFDRDQALSR EDAQFISWEH
PLIRNGLDLV LSGDTGSCAV SLLKNKALPV GTLLAELVYV VEAQAPKHLQ LTRFLPPTPV
RLLMDRKGTN LAAQVEFESF NRQLNAVNRH TSSKLVNAVQ ADVHAMLQQA EALVEAQARQ
LITEAQEQAD LQLRRELERL EALKAVNPNI REDELTALES QREQVLSNLH EANWRLDAIR
LVVVTHQ
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