Gene PC1_3622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3622 
Symbol 
ID8134602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4085210 
End bp4086832 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content55% 
IMG OID644866922 
ProductXylan 1,4-beta-xylosidase 
Protein accessionYP_003019173 
Protein GI253689983 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3507] Beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.573352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGTGT CCCGGCTGAT AGGGAAGGGT GTATTGAGCG GTATCTTACT GATGGCAATG 
GGTATCGGTC AGGCAATGGC CTGTCAGGCT GGCCCTGCTA ACGAATGGAA ACGGGGTATT
GAACAGCAGC GTCAGGCGGA TTTGGGCAAT GGCTGTTATC TCAATCCGAT TATTGCGGGC
GATCATCCCG ACCCTACGAT TATCAAGGAT GGGGATGACT ACTACATGAC GTTCTCGTCA
TTTGACGATA TCCCCGGACT GCTGATTTGG CACTCGCGCG ATTTAGTGAA CTGGCAGCCG
CTTGGCCCGG CGATCGCGAC GCCCGTTGAC GCGATCTGGG CACCGGATTT GGTGAAACAC
GACGGCAAAT ATTATATCTA CTTCACCACC AACCGGATTA TCGACGCCAA AGGAACGAAA
AAGAAAACGC TGTATGTGAT TACCGCCGAT GATATTCGCG GCCCGTGGAC GCCGCCGAAG
GATACGGGCT TGAAAAATCC GGCCAGCGAT CCCGGTCATG TGGTGGGAGA GGACGGTAAA
CGTTACATCT TTATGTCTGG CGGCAATCGC GTGCAGTTAA CCGATGACGG GCTGTCGACG
GTCGGCGACA TGGAGGTGGT CTATCAGGGG TGGCAATACC CGGAAGAGTG GGATGTGGAA
AGCTTCTCGC AGGAAGGGCC GAAGATGCTG CGCCACGGCG ACTATTTCTA CATGGTACTG
GCGGAAGGCG GAACGGCGGG GCCGCCGACC GGACACATGG TGATTGCTGC GCGTTCCAAA
TCGATCAACG GGCCGTGGGA AAATTCCCCG CATAACCCGA TTATTCGCAC GCAGGATCGT
TCAGAAAAGT GGTGGTCACG CGGCCATGCG ACGCTGATCG AAGGGCCGGA TAAAAACTGG
TACATGGTGT ATCACGGTTA TGAAAACGGC TTTATGACGC TGGGGCGGCA GGCGATGTTG
GAGCCGATCG TCTGGGGCAA TGATGGCTGG TTTACGTCTG CCGGGTTTGA TACCGGTAAA
CCGATTCGCA AACCGGCAGG GGGCGAAGCG GTGCCGCACG GTATTGGCTG GTCTGATAGC
TTTACCGACG AGAAATTTCC GGCTCGCTGG CATTTTTACC GCGCCAATGC GGAAGAACTG
AAACGGGTTA CGCTCAGCGA CGGCAAACTG CATCTTAAGG CAAAAGGCAC ATCGCCAAAA
GACAGTGCGC CGTTGACGAT GATCCCCGGC GATCAGGCTT ACCAAATTGA GGTTACGGCG
AATTTCGCCC CTGGCGCGCA GGCTGGCCTA CTGCTGTTCT ACAACGCGAA GCTGTATGTC
GGGCTGTCGT TTAATCAGGA TGGTACTGTC ATGCACCGCT ATGGGCTGGA AAGGGCGGAG
AAGAAACTGC CACACATTAC AGGCAATGAG GTGCAGATTC TGATGAGAAA CGATCGCCAT
ATCGTGACGT TTTACACCCG AACGTCGGCT CAGGAACCGT GGAAGAAATA CCCGGTGCAG
ATGGAGGTAT CCGGCTACCA TCACAATGTC GCGTATGACT TCCTCAGCTT ACGGCCCGCC
TTGTATGCGT CGGGTGAGGG AGACGTGACG TTCAGCAACC TGCGTTATCA GGCGTTGCCT
TAA
 
Protein sequence
MGVSRLIGKG VLSGILLMAM GIGQAMACQA GPANEWKRGI EQQRQADLGN GCYLNPIIAG 
DHPDPTIIKD GDDYYMTFSS FDDIPGLLIW HSRDLVNWQP LGPAIATPVD AIWAPDLVKH
DGKYYIYFTT NRIIDAKGTK KKTLYVITAD DIRGPWTPPK DTGLKNPASD PGHVVGEDGK
RYIFMSGGNR VQLTDDGLST VGDMEVVYQG WQYPEEWDVE SFSQEGPKML RHGDYFYMVL
AEGGTAGPPT GHMVIAARSK SINGPWENSP HNPIIRTQDR SEKWWSRGHA TLIEGPDKNW
YMVYHGYENG FMTLGRQAML EPIVWGNDGW FTSAGFDTGK PIRKPAGGEA VPHGIGWSDS
FTDEKFPARW HFYRANAEEL KRVTLSDGKL HLKAKGTSPK DSAPLTMIPG DQAYQIEVTA
NFAPGAQAGL LLFYNAKLYV GLSFNQDGTV MHRYGLERAE KKLPHITGNE VQILMRNDRH
IVTFYTRTSA QEPWKKYPVQ MEVSGYHHNV AYDFLSLRPA LYASGEGDVT FSNLRYQALP