| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3609 |
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| Symbol | |
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| ID | 8134589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4070911 |
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| End bp | 4072311 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866909 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_003019160 |
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| Protein GI | 253689970 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGA CGTTATATCA AAAGTTGTTT GAAGCGCACG TGGTTCATGA AGCGCCAAAC
GAAACGCCGC TGCTGTATAT CGACAGACAT CTGGTACACG AAGTAACTTC CCCACAGGCT
TTCGACGGCC TGCGCGCGAT GGGCCGCAAG GTTCGTCAAC CGGGGAAAAC CTTCGCGACC
ATGGACCACA ACGTGTCCAC GCAAACCAAA GACATCAACG CCAGCGGCGA GATGGCCCGC
ATCCAGATGC AGGAGCTGAT CAAAAACTGT GCGGAATTCG GTGTTCAGCT GTATGACCTG
AACCACCCGT ATCAGGGCAT CGTTCACGTT ATTGGGCCTG AGCAAGGAAT GACGCTGCCA
GGCATGACCA TCGTTTGTGG TGACTCGCAC ACGGCAACGC ACGGCGCATT TGGTTCACTG
GCCTTCGGTA TTGGTACGTC GGAAGTGGAA CATGTGCTGG CGACACAAAC CCTGAAGCAG
GGTCGCGCCA AAACTATGAA GATTGAAGTC ACCGGCGATG CACCACACGG TATCACCGCA
AAAGACATCG TGCTGGCGAT CATCGGTAAA ACCGGTAGCG CAGGCGGTAC CGGTCATGTC
GTTGAATTCT GTGGCAAAGC CATCCGTGCG CTGAGCATGG AAGGCCGTAT GACACTGTGC
AACATGGCGA TTGAAATGGG CGCGAAAGCT GGGCTGGTCG CGCCGGACGA GACGACCTTC
AACTACCTGA AAGGCCGTCA GTTTGCGCCG AAGGACGCCA ACTGGGATGC CGCCGTTGCG
TACTGGAACA CGCTGAAATC GGATGATGAC GCGCAGTTCG ATACGGTTGT CACGCTGGAC
GCAGCTCAGA TCGCGCCACA GGTCACCTGG GGCACCAACC CTGGCCAGGT TATCGCCGTT
AATCAGGAAA TCCCTAACCC TGACTCTTTC AGCGATCCGG TAGAGCGCGC CTCTGCTGCC
AAAGCGCTGG CGTATATGGA TCTGCAACCC GGTATTAAAC TGACCGACGT GAAGATCGAT
AAAGTCTTTA TTGGTTCCTG CACCAACTCG CGTATTGAAG ATTTGCGTGC CGCGGCAGAA
ATCGCCAAAG GGCGCAAAGT TGCCGCAGGC GTTCAGGCTA TCGTCGTACC CGGTTCCGGC
CCGGTAAAAA CCATGGCGGA GCTGGAAGGG CTGGATAAAG TGTTCATCGA AGCGGGCTTT
GAGTGGCGCT TACCGGGCTG TTCCATGTGT CTGGCGATGA ACAATGACCG TCTGAACCCC
GGCGAGCGTT GCGCATCAAC CAGCAACCGT AACTTTGAAG GCCGTCAGGG GCGCGCTGGC
CGCACCCATC TGGTCAGCCC GGCAATGGCT GCGGCTGCAG CGGTAACGGG TCGCTTTGCC
GACGTCCGCG AGTTGAATTA A
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| Protein sequence | MGKTLYQKLF EAHVVHEAPN ETPLLYIDRH LVHEVTSPQA FDGLRAMGRK VRQPGKTFAT
MDHNVSTQTK DINASGEMAR IQMQELIKNC AEFGVQLYDL NHPYQGIVHV IGPEQGMTLP
GMTIVCGDSH TATHGAFGSL AFGIGTSEVE HVLATQTLKQ GRAKTMKIEV TGDAPHGITA
KDIVLAIIGK TGSAGGTGHV VEFCGKAIRA LSMEGRMTLC NMAIEMGAKA GLVAPDETTF
NYLKGRQFAP KDANWDAAVA YWNTLKSDDD AQFDTVVTLD AAQIAPQVTW GTNPGQVIAV
NQEIPNPDSF SDPVERASAA KALAYMDLQP GIKLTDVKID KVFIGSCTNS RIEDLRAAAE
IAKGRKVAAG VQAIVVPGSG PVKTMAELEG LDKVFIEAGF EWRLPGCSMC LAMNNDRLNP
GERCASTSNR NFEGRQGRAG RTHLVSPAMA AAAAVTGRFA DVRELN
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