Gene PC1_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3608 
Symbol 
ID8134588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4069817 
End bp4070908 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content56% 
IMG OID644866908 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_003019159 
Protein GI253689969 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGA GCTACCATAT CGCCGTTTTA CCCGGAGACG GCATTGGCCC GGAAGTAATG 
GCACAGGCGC ACAAAGTACT GGATGCAGTA CGCCAGCGTT TTGGCATCCG CATTACCACC 
AGCGAATATG ACGTTGGCGG TATCGCCATT GACCGTCAGG GCACGCCGCT GCCGCAAGCG 
ACCGTCGCGG GCTGTGAGCA GGCCGATGCG ATTCTGTTCG GCTCCGTGGG CGGCCCGAAA 
TGGGAACATT TGCCACCGGC AGAGCAACCT GAGCGCGGTG CACTGTTGCC TCTGCGTAAA 
CATTTCAAAC TGTTCAGCAA CCTGCGTCCT GCTCGTCTGT ATCAGGGGCT GGAAGCGTTT 
TGTCCGCTGC GCAGTGACAT CGCCGCGAAA GGCTTTGATA TTCTGTGCGT CCGCGAACTG 
ACGGGTGGCA TCTACTTCGG TCAGCCAAAA GGACGTGAAG GTAGCGGCCA GTATGAACGC 
GCTTTCGATA CCGAGGTGTA TCACCGTTTC GAGATTGAGC GCATCGCGCA TATTGCGTTT 
GAGTCCGCCC GTAAACGTCG CGGTATCGTG ACCTCTATCG ATAAAGCCAA CGTGCTGCAA 
AGCTCTATTC TGTGGCGCGA GATCGTGAAC GAAGTTTCCA AAGCCTATCC AGATGTGAAG 
CTGTCCCATC TGTATATCGA TAACGCGACA ATGCAGTTAA TCAAAGATCC GTCTCAGTTT 
GACGTGATGC TGTGTTCTAA CCTGTTCGGA GACATTCTGT CCGACGAGTG CGCCATGATT 
ACCGGTTCAA TGGGTATGCT GCCTTCCGCA AGCCTGAACG AACAAGGCTT CGGTTTATAC 
GAGCCTGCTG GCGGTTCCGC GCCGGATATC GCCGGTAAAG ACATTGCTAA CCCGATTGCG 
CAGATTCTGT CGCTGTCGCT GCTGCTGCGC TACAGCCTGG GTGCGGATGA TGCCGCAGAC 
GCGATCGAAA AAGCGGTCAA TACCGCACTG GCTGAAGGCT ATCGTACCGC CGATCTGGCA 
AGTACCAGCA ACGCGATCGG TACCAATGAG ATGGGCGACG TGATTGCGCG TTTTGTGGCG 
CAAGGGGCAT AA
 
Protein sequence
MTKSYHIAVL PGDGIGPEVM AQAHKVLDAV RQRFGIRITT SEYDVGGIAI DRQGTPLPQA 
TVAGCEQADA ILFGSVGGPK WEHLPPAEQP ERGALLPLRK HFKLFSNLRP ARLYQGLEAF 
CPLRSDIAAK GFDILCVREL TGGIYFGQPK GREGSGQYER AFDTEVYHRF EIERIAHIAF 
ESARKRRGIV TSIDKANVLQ SSILWREIVN EVSKAYPDVK LSHLYIDNAT MQLIKDPSQF 
DVMLCSNLFG DILSDECAMI TGSMGMLPSA SLNEQGFGLY EPAGGSAPDI AGKDIANPIA 
QILSLSLLLR YSLGADDAAD AIEKAVNTAL AEGYRTADLA STSNAIGTNE MGDVIARFVA 
QGA