| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3606 |
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| Symbol | |
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| ID | 8134586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4066003 |
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| End bp | 4067808 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866906 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003019157 |
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| Protein GI | 253689967 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATC ATTTACAGCC ATATCATGTG GTGCACCGGG TTCAAGATCG GATCAATCAC
TGCGCGGGTC GTATTGCGCT GCGCGAGTGG ACGCCTGCGG GCGAACAACA GCTCACCTGG
ACACAGGCCG GACAGCGCAT TCGGCGGATT GCAAGCGCGC TCCTGGCGCT GAGAGTCGAC
GTTCAGGAAC GTGTAGCGAT TTTCTCTCAT AACTCGATGA ATTGGTCGCT GGCCGATCTG
GCGTTGCTGC ACCTGCGTGC GATCAGTGTG CCAATCTATG CCACCAATAC GGCGGCACAG
GCCGCGTTCA TCATCAATGA TGCCGATATC CGTACGATAT TTGTTGGTGG TCAGGAGCAG
TTGGATGCGT TGCTGTCGTT ACGTGAGAGC TGCCCGCAAC TGCGAAATAT TATCGTGATG
GATGAGGGCG TTAACCTGCG CGGTAGCGAC ATCGTTCAGT CCTTACATGA GTTTGAAGCG
CAGGCGGTAG ACGAGTTCTG GCGTGATGAA TGGCAAACGC GTATCGACAG CCGCGATCTC
AACGATCTGT TTACGCTGAT TTATACCTCT GGCACCACTG GCGAGCCGAA AGGTGTCATG
CTGGATTATA CCAACATGGC GATGCAGCTT AAGCTGCACG ACGATCGTCT GGATATGTCA
GAAAATGACG TATCGCTCTG TTTCTTACCG CTTTCACACG TATTTGAGCG CGCATGGAGT
TTTGTCATTA TGCATCGCGG CGCACAGAAC GTGTACCTCC GTGATACGAA TCTGGTACGT
GCCGCGATGC AGGCGGTGAA GCCTACGGTG ATGTGCGCGG TACCGCGTTT TTATGAGAAA
GTGTATAGCG CAATCCATGA AAAAGTGGCG CAGGCACCGT GGTATCGCCA GCGGCTCTTC
AACTGGGCTG TTACGCAGGG GCAATACGTT TTTCTGGCTA GCCAGACGGC GAAAAAAGCG
GGACTCTTCC GCCGCATTAT GCATCGCTAT GCTGACCGTC TGGTGCTAGG GAAACTGCGC
CAGCTTCTGG GAGGCGAGAT TCGTTTTATG CCAGCCGCAG GCGCGCGACT GGATGACAAT
ATCATTATGT TTTTCAGCTC GATAGGGATT CGCATCATCT ATGGTTACGG TATGACCGAA
ACCTGTGCGA CGGTTTCCTG TTGGGAAGAA AATCGTTTCC GCTTAGGTTC TATTGGCACG
CCGCTGCCGG GTATTGAAGT CCGTATTGGT GAGGAAAAAG AGATTCAGGT GCGTGGAGCG
ACCATCATGC GCGGCTATTT CCATCGTCCG CAGGAAACCG CAGAAGCCTT TACCGAAGAC
GGCTGGCTGA AAACTGGCGA CGCGGGGGAA CTGGATGCCA ACGGTAACCT GTTTATTACC
GAGCGCTTGA AAGATCTGAT GAAAACCTCG GGGGGGAAAT ATATCGCCCC GCAGCATCTG
GAAGGGACGC TGGGACAGGA TCGCTTCATC GAGCAGGTTG CGATTATCGC AGACACGCGT
AAGTACGTCT CTGCGCTGAT TGTTCCCTGT TTCGAGGCGC TGGAGGAATA CGCGCACTCT
ATCAATCTGA AATACCACGA TCGTCTGGAG TTGCTGCGCC ACAGCCATAT TATTGAGCTG
TTCGAGCAGC GCCTGCGGGA GATGCAGAAG GAACTTTCCC GTGTTGAGCA GGTAAAGAAA
TTCACGCTGC TGCCTGTGCC GTTTTCGATG GCGGAAGGGG AGTTGACGCC AACGCTCAAG
CTGCGCAGAA AGATCATCAA CCAGCGTTAC CAGTTGGAAA TTGATGCGAT GTACGCCGAA
TCCTGA
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| Protein sequence | MTNHLQPYHV VHRVQDRINH CAGRIALREW TPAGEQQLTW TQAGQRIRRI ASALLALRVD
VQERVAIFSH NSMNWSLADL ALLHLRAISV PIYATNTAAQ AAFIINDADI RTIFVGGQEQ
LDALLSLRES CPQLRNIIVM DEGVNLRGSD IVQSLHEFEA QAVDEFWRDE WQTRIDSRDL
NDLFTLIYTS GTTGEPKGVM LDYTNMAMQL KLHDDRLDMS ENDVSLCFLP LSHVFERAWS
FVIMHRGAQN VYLRDTNLVR AAMQAVKPTV MCAVPRFYEK VYSAIHEKVA QAPWYRQRLF
NWAVTQGQYV FLASQTAKKA GLFRRIMHRY ADRLVLGKLR QLLGGEIRFM PAAGARLDDN
IIMFFSSIGI RIIYGYGMTE TCATVSCWEE NRFRLGSIGT PLPGIEVRIG EEKEIQVRGA
TIMRGYFHRP QETAEAFTED GWLKTGDAGE LDANGNLFIT ERLKDLMKTS GGKYIAPQHL
EGTLGQDRFI EQVAIIADTR KYVSALIVPC FEALEEYAHS INLKYHDRLE LLRHSHIIEL
FEQRLREMQK ELSRVEQVKK FTLLPVPFSM AEGELTPTLK LRRKIINQRY QLEIDAMYAE
S
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