| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3594 |
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| Symbol | murD |
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| ID | 8134574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4051993 |
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| End bp | 4053309 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866894 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_003019145 |
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| Protein GI | 253689955 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGACT ATCAGGGTAA AAAAGTCGTC ATTATCGGGT TGGGTCTGAC CGGGCTCTCC
TGTGTTGATT TCTTTGTCGC ACGCGGTGTG ATTCCGCGCG TGGTGGATAC CCGTATCAGT
CCGCCGGGTC TGGATAAGTT GCCGGAGCAG GTAGAGCGAC ACCTCGGCAG CTTGAATGAA
GACTGGCTGA TGAGCGCAGA TTTGATCGTC GCCAGTCCCG GCATTGCGTT GGCGACGCCG
ATTCTGTGTG ATGCTGCCGA CGCTGGCATT GAAATTGTCG GTGATATCGA GCTGTTCTGC
CGTGAAGCGC AGGCTCCGAT TGTGGCGATT ACCGGTTCTA ACGGTAAAAG CACGGTGACG
ACGCTGGTCG GTGAAATGGC GCGTGCCGCA GGCTGGCAAG TGGGGGTTGG CGGCAATATC
GGCCTGCCTG CGCTGCAACT GCTTGAACAG CCCGCTCAGC TTTATGTATT GGAGCTGTCG
AGTTTTCAAC TGGAAACGAC GAGCAGTCTG CACGCCGCTG CGGCAACCAT TCTGAACGTG
ACGGAAGATC ACACCAACCG TTATCCGTTT GGCCTACAGC AGTATCGGGC GGCCAAATTG
CGTATTTATG AGCATGCAGA TTTATGTGTT GTGAACGCTG ATGATGCGCT GACTATGCCG
GTTCGCGGTG CGGATGCGCG CTGCCGTAGT TTTGGTGTCG ATGTCGGCGA TTATCACCTT
AATCGTCAGC AGGGAGAAAC CTGGCTGCGG GTTGATGGTG AACGTGTGCT TAACACACGT
GAAATCAAGC TGGTCGGGCA ACACAATTAT ACGAATGCAT TGGCGGCGCT GGCGCTGGCG
GATGCTGTGA AGATCCCGCG TGCTTCTGCG CTGACGGCGT TGACGACGTT TGCCGGGCTG
CCGCACCGTT TTCAAATGGC CTTCGAGCAT AACGGCGTGC GGTGGATCAA CGATTCTAAA
GCCACCAATG TGGGCAGCAC TGAGGCCGCA TTGAGCGGCT TGACTGTCGA AGGCACGTTG
CACCTGCTGT TAGGCGGTGA TGGGAAATCT GCCGATTTCT CTCCGCTGGT GCCGTATTTA
CAGGGTGAGC ACATTCGTTT GTATTGCTTC GGTCGTGATG GACAGCAGTT GGCTGCGTTG
CGCCCGGAAA TTGCTGAACA AACAGAAACG ATGGAGCAGG CGATGCGTGT CATCGCCGAA
CGCGTTAAGC CGGGTGATAT GGTGTTACTG TCGCCAGCCT GCGCAAGTTT GGATCAGTTC
CGCAGTTTTG AACAGCGAGG CGATGAGTTT GCTCGTCTGG CGGAGGAGTT AGGCTGA
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| Protein sequence | MVDYQGKKVV IIGLGLTGLS CVDFFVARGV IPRVVDTRIS PPGLDKLPEQ VERHLGSLNE
DWLMSADLIV ASPGIALATP ILCDAADAGI EIVGDIELFC REAQAPIVAI TGSNGKSTVT
TLVGEMARAA GWQVGVGGNI GLPALQLLEQ PAQLYVLELS SFQLETTSSL HAAAATILNV
TEDHTNRYPF GLQQYRAAKL RIYEHADLCV VNADDALTMP VRGADARCRS FGVDVGDYHL
NRQQGETWLR VDGERVLNTR EIKLVGQHNY TNALAALALA DAVKIPRASA LTALTTFAGL
PHRFQMAFEH NGVRWINDSK ATNVGSTEAA LSGLTVEGTL HLLLGGDGKS ADFSPLVPYL
QGEHIRLYCF GRDGQQLAAL RPEIAEQTET MEQAMRVIAE RVKPGDMVLL SPACASLDQF
RSFEQRGDEF ARLAEELG
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