Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3568 |
Symbol | aceE |
ID | 8134548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4022412 |
End bp | 4025075 |
Gene Length | 2664 bp |
Protein Length | 887 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644866868 |
Product | pyruvate dehydrogenase subunit E1 |
Protein accession | YP_003019119 |
Protein GI | 253689929 |
COG category | [C] Energy production and conversion |
COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.597413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATC GTTTAAATAA TGACGTGGAT CCGATCGAAA CCCGCGACTG GCTGCAGGCG ATCGAATCGG TCATCCGTGA AGAGGGTGTT GAACGCGCCC AGTTCCTGAT TGATCAGGTT CTGAGTGAAG CACGTAAAGG CGGTGTCAGC GTTGCTGCTG GTACGGCTGC ACGTCAATAC ATCAACACCA TCGCAGTGGA AGACGAGCCG GAGTACCCTG GTAATCTGGA TCTGGAACGT CGTATTCGCT CAGCAATCCG CTGGAACGCG ATCATGACGG TACTGCGTGC TTCGAAAAAA GATCTGGATC TGGGTGGCCA CATGGCTTCT TTCCAGTCTT CCGCCACTTT CTATGAAGTG TGCTTTAACC ACTTCTTCCG TGCTCGCACT GCGCAGGACG GCGGCGACCT GGTCTACTTC CAGGGCCACA TTTCTCCGGG CGTTTACGCT CGTGCCTTCC TTGAAGGCCG TCTGACCGAA GACCAGATGA ATAACTTCCG TCAGGAAGTT CACGGTAACG GTCTGTCTTC TTATCCGCAC CCTAAACTGA TGCCAGACTT CTGGCAGTTC CCGACCGTAT CTATGGGTCT GGGCCCGATT GGTGCTATCT ACCAGGCTAA ATTCCTGAAG TATCTGGAAA ACCGTGGCCT GAAAGATACC TCTAAGCAAA CCGTTTATGC CTTCCTGGGC GACGGTGAAA TGGACGAACC AGAATCCAAA GGTGCGATCA CCATCGCGAC CCGTGAAAAA CTGGATAACC TGGTATTCGT TATCAACTGT AACTTGCAGC GCTTGGATGG TCCGGTTACT GGTAACGGTA AGATCATCAA CGAACTGGAA GGCATCTTCA GCGGCGCTGG CTGGGATGTG ATTAAAGTGA TGTGGGGCGA CCGTTGGGAC GAACTGCTGC GTAAAGACAC CAGCGGTAAA CTGATCCAAC TGATGGAAGA AACCGTTGAC GGTGACTACC AGACCTTCAA ATCCAAAAAC GGTGCCTATG TGCGTGAGCA CTTCTTCGGT AAATACCCGG AGACGGCTGA ACTGGTTAAA GACTGGACCG ACGATCAGAT TTGGTCACTG AACCGTGGTG GTCACGATCC GAAGAAAGTC TACGCTGCAC TGAAAAAAGC ACAGGATACC AAAGGCAAAC CAACCGTTAT TCTGGCGCAT ACCATTAAAG GTTATGGTAT GGGCGACGCG GCTGAAGGTA AGAACATCGC TCACCAGGTT AAGAAAGTTA ACATGGATGG CGTGCGTTAC TTCCGTGACC GCTTCAACGT GCCAGTATCT GATGCCGACA TCGAAAGCCT GCCGTACATC ACTTTCGATA AAGATTCTGC AGAGTACAAA TACCTGCACG AGCGTCGTCA GGCGCTGGGT GGCTACCTGC CGTCTCGTCA GCCGAACTTT GATGAGAAGC TGGAACTGCC AACGCTGGAA GATTTCAGTA CTCTTCTGGA AGAGCAGAAC AAAGAAATCT CTACCACTAT CGCGTTTGTT CGTGCCCTGA ACGTGATGCT GAAGAACCAA TCTATCAAAG ATCGTCTGGT TCCAATCATC GCTGACGAAG CGCGTACCTT TGGTATGGAA GGTCTGTTCC GCCAGATCGG TATTTATAGC CCGAAAGGCC AACAGTACAC TCCGCAGGAC CGTGAGCAGG TTGCTTACTA CAAAGAAGAC CAGAAAGGTC AGATTCTGCA GGAAGGTATC AACGAACTGG GCGCAGGTTC ATCCTGGCTG GCGGCGGCAA CGTCTTACAG CACCAACAAC CTGCCGATGA TCCCGTTCTA CATCTACTAC TCCATGTTCG GTTTCCAACG TATCGGCGAT CTGTGCTGGG CAGCGGGTGA CCAACAGGCG CGTGGCTTCC TGATCGGTGG TACTTCAGGC CGTACGACGC TGAACGGTGA AGGTCTGCAG CACGAAGATG GTCACAGCCA CATTCAGTCG CTGACCATCC CGAACTGTAT CTCCTACGAT CCAGCATTCG CCTATGAAGT TGCGGTCATC ATGCATGACG GTCTGCACCG CATGTACGGT GAAGCGCAGG AAAACATTTA CTACTACATC ACCACGCTGA ACGAAAACTA CCACATGCCT GCGATGCCGC AGGGTGCGGA AGAAGGTATC CGTAAGGGTA TCTACAAGCT GGAAACGGTT GAAGGTAGCA AAGGCAAAGT GCAGCTGCTG GGCTCAGGTT CTATCCTGCG TCACGTACGC GAAGCCGCTC AGATTCTGGC GAAAGACTAC GGCATCGGTT CTGACGTATT CAGCGTAACG TCCTTCACTG AACTGGCTCG CGAAGGCCAG GATTGTGAGC GTTGGAACAT GCTGCATCCG ACCGAAACGC CGCGCGTACC TTACGTGGCT CAGGTACTGA GCGATGCGCC AGCGGTTGCA TCTACTGACT ACATGAAGCT GTTTGCTGAG CAAATCCGTA ACTTCATCCC AGCGAGCGAT TACCGCGTAC TGGGTACTGA CGGTTTCGGT CGTTCTGACA GCCGTGAGAA CCTGCGTCAC CACTTCGAAG TGGACGCGTC TTACGTTGTT GTTGCGGCTC TGGGTGAACT GGCTAAACGC GGTGAAATCG ATAAGAAAGT GGTTGCTGAT GCCATCACTA AATTCAACAT CGATGCAGAT AAAGTTAACC CGCGTCTGGC ATAA
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Protein sequence | MSDRLNNDVD PIETRDWLQA IESVIREEGV ERAQFLIDQV LSEARKGGVS VAAGTAARQY INTIAVEDEP EYPGNLDLER RIRSAIRWNA IMTVLRASKK DLDLGGHMAS FQSSATFYEV CFNHFFRART AQDGGDLVYF QGHISPGVYA RAFLEGRLTE DQMNNFRQEV HGNGLSSYPH PKLMPDFWQF PTVSMGLGPI GAIYQAKFLK YLENRGLKDT SKQTVYAFLG DGEMDEPESK GAITIATREK LDNLVFVINC NLQRLDGPVT GNGKIINELE GIFSGAGWDV IKVMWGDRWD ELLRKDTSGK LIQLMEETVD GDYQTFKSKN GAYVREHFFG KYPETAELVK DWTDDQIWSL NRGGHDPKKV YAALKKAQDT KGKPTVILAH TIKGYGMGDA AEGKNIAHQV KKVNMDGVRY FRDRFNVPVS DADIESLPYI TFDKDSAEYK YLHERRQALG GYLPSRQPNF DEKLELPTLE DFSTLLEEQN KEISTTIAFV RALNVMLKNQ SIKDRLVPII ADEARTFGME GLFRQIGIYS PKGQQYTPQD REQVAYYKED QKGQILQEGI NELGAGSSWL AAATSYSTNN LPMIPFYIYY SMFGFQRIGD LCWAAGDQQA RGFLIGGTSG RTTLNGEGLQ HEDGHSHIQS LTIPNCISYD PAFAYEVAVI MHDGLHRMYG EAQENIYYYI TTLNENYHMP AMPQGAEEGI RKGIYKLETV EGSKGKVQLL GSGSILRHVR EAAQILAKDY GIGSDVFSVT SFTELAREGQ DCERWNMLHP TETPRVPYVA QVLSDAPAVA STDYMKLFAE QIRNFIPASD YRVLGTDGFG RSDSRENLRH HFEVDASYVV VAALGELAKR GEIDKKVVAD AITKFNIDAD KVNPRLA
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