Gene PC1_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3568 
SymbolaceE 
ID8134548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4022412 
End bp4025075 
Gene Length2664 bp 
Protein Length887 aa 
Translation table11 
GC content52% 
IMG OID644866868 
Productpyruvate dehydrogenase subunit E1 
Protein accessionYP_003019119 
Protein GI253689929 
COG category[C] Energy production and conversion 
COG ID[COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component 
TIGRFAM ID[TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.597413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATC GTTTAAATAA TGACGTGGAT CCGATCGAAA CCCGCGACTG GCTGCAGGCG 
ATCGAATCGG TCATCCGTGA AGAGGGTGTT GAACGCGCCC AGTTCCTGAT TGATCAGGTT
CTGAGTGAAG CACGTAAAGG CGGTGTCAGC GTTGCTGCTG GTACGGCTGC ACGTCAATAC
ATCAACACCA TCGCAGTGGA AGACGAGCCG GAGTACCCTG GTAATCTGGA TCTGGAACGT
CGTATTCGCT CAGCAATCCG CTGGAACGCG ATCATGACGG TACTGCGTGC TTCGAAAAAA
GATCTGGATC TGGGTGGCCA CATGGCTTCT TTCCAGTCTT CCGCCACTTT CTATGAAGTG
TGCTTTAACC ACTTCTTCCG TGCTCGCACT GCGCAGGACG GCGGCGACCT GGTCTACTTC
CAGGGCCACA TTTCTCCGGG CGTTTACGCT CGTGCCTTCC TTGAAGGCCG TCTGACCGAA
GACCAGATGA ATAACTTCCG TCAGGAAGTT CACGGTAACG GTCTGTCTTC TTATCCGCAC
CCTAAACTGA TGCCAGACTT CTGGCAGTTC CCGACCGTAT CTATGGGTCT GGGCCCGATT
GGTGCTATCT ACCAGGCTAA ATTCCTGAAG TATCTGGAAA ACCGTGGCCT GAAAGATACC
TCTAAGCAAA CCGTTTATGC CTTCCTGGGC GACGGTGAAA TGGACGAACC AGAATCCAAA
GGTGCGATCA CCATCGCGAC CCGTGAAAAA CTGGATAACC TGGTATTCGT TATCAACTGT
AACTTGCAGC GCTTGGATGG TCCGGTTACT GGTAACGGTA AGATCATCAA CGAACTGGAA
GGCATCTTCA GCGGCGCTGG CTGGGATGTG ATTAAAGTGA TGTGGGGCGA CCGTTGGGAC
GAACTGCTGC GTAAAGACAC CAGCGGTAAA CTGATCCAAC TGATGGAAGA AACCGTTGAC
GGTGACTACC AGACCTTCAA ATCCAAAAAC GGTGCCTATG TGCGTGAGCA CTTCTTCGGT
AAATACCCGG AGACGGCTGA ACTGGTTAAA GACTGGACCG ACGATCAGAT TTGGTCACTG
AACCGTGGTG GTCACGATCC GAAGAAAGTC TACGCTGCAC TGAAAAAAGC ACAGGATACC
AAAGGCAAAC CAACCGTTAT TCTGGCGCAT ACCATTAAAG GTTATGGTAT GGGCGACGCG
GCTGAAGGTA AGAACATCGC TCACCAGGTT AAGAAAGTTA ACATGGATGG CGTGCGTTAC
TTCCGTGACC GCTTCAACGT GCCAGTATCT GATGCCGACA TCGAAAGCCT GCCGTACATC
ACTTTCGATA AAGATTCTGC AGAGTACAAA TACCTGCACG AGCGTCGTCA GGCGCTGGGT
GGCTACCTGC CGTCTCGTCA GCCGAACTTT GATGAGAAGC TGGAACTGCC AACGCTGGAA
GATTTCAGTA CTCTTCTGGA AGAGCAGAAC AAAGAAATCT CTACCACTAT CGCGTTTGTT
CGTGCCCTGA ACGTGATGCT GAAGAACCAA TCTATCAAAG ATCGTCTGGT TCCAATCATC
GCTGACGAAG CGCGTACCTT TGGTATGGAA GGTCTGTTCC GCCAGATCGG TATTTATAGC
CCGAAAGGCC AACAGTACAC TCCGCAGGAC CGTGAGCAGG TTGCTTACTA CAAAGAAGAC
CAGAAAGGTC AGATTCTGCA GGAAGGTATC AACGAACTGG GCGCAGGTTC ATCCTGGCTG
GCGGCGGCAA CGTCTTACAG CACCAACAAC CTGCCGATGA TCCCGTTCTA CATCTACTAC
TCCATGTTCG GTTTCCAACG TATCGGCGAT CTGTGCTGGG CAGCGGGTGA CCAACAGGCG
CGTGGCTTCC TGATCGGTGG TACTTCAGGC CGTACGACGC TGAACGGTGA AGGTCTGCAG
CACGAAGATG GTCACAGCCA CATTCAGTCG CTGACCATCC CGAACTGTAT CTCCTACGAT
CCAGCATTCG CCTATGAAGT TGCGGTCATC ATGCATGACG GTCTGCACCG CATGTACGGT
GAAGCGCAGG AAAACATTTA CTACTACATC ACCACGCTGA ACGAAAACTA CCACATGCCT
GCGATGCCGC AGGGTGCGGA AGAAGGTATC CGTAAGGGTA TCTACAAGCT GGAAACGGTT
GAAGGTAGCA AAGGCAAAGT GCAGCTGCTG GGCTCAGGTT CTATCCTGCG TCACGTACGC
GAAGCCGCTC AGATTCTGGC GAAAGACTAC GGCATCGGTT CTGACGTATT CAGCGTAACG
TCCTTCACTG AACTGGCTCG CGAAGGCCAG GATTGTGAGC GTTGGAACAT GCTGCATCCG
ACCGAAACGC CGCGCGTACC TTACGTGGCT CAGGTACTGA GCGATGCGCC AGCGGTTGCA
TCTACTGACT ACATGAAGCT GTTTGCTGAG CAAATCCGTA ACTTCATCCC AGCGAGCGAT
TACCGCGTAC TGGGTACTGA CGGTTTCGGT CGTTCTGACA GCCGTGAGAA CCTGCGTCAC
CACTTCGAAG TGGACGCGTC TTACGTTGTT GTTGCGGCTC TGGGTGAACT GGCTAAACGC
GGTGAAATCG ATAAGAAAGT GGTTGCTGAT GCCATCACTA AATTCAACAT CGATGCAGAT
AAAGTTAACC CGCGTCTGGC ATAA
 
Protein sequence
MSDRLNNDVD PIETRDWLQA IESVIREEGV ERAQFLIDQV LSEARKGGVS VAAGTAARQY 
INTIAVEDEP EYPGNLDLER RIRSAIRWNA IMTVLRASKK DLDLGGHMAS FQSSATFYEV
CFNHFFRART AQDGGDLVYF QGHISPGVYA RAFLEGRLTE DQMNNFRQEV HGNGLSSYPH
PKLMPDFWQF PTVSMGLGPI GAIYQAKFLK YLENRGLKDT SKQTVYAFLG DGEMDEPESK
GAITIATREK LDNLVFVINC NLQRLDGPVT GNGKIINELE GIFSGAGWDV IKVMWGDRWD
ELLRKDTSGK LIQLMEETVD GDYQTFKSKN GAYVREHFFG KYPETAELVK DWTDDQIWSL
NRGGHDPKKV YAALKKAQDT KGKPTVILAH TIKGYGMGDA AEGKNIAHQV KKVNMDGVRY
FRDRFNVPVS DADIESLPYI TFDKDSAEYK YLHERRQALG GYLPSRQPNF DEKLELPTLE
DFSTLLEEQN KEISTTIAFV RALNVMLKNQ SIKDRLVPII ADEARTFGME GLFRQIGIYS
PKGQQYTPQD REQVAYYKED QKGQILQEGI NELGAGSSWL AAATSYSTNN LPMIPFYIYY
SMFGFQRIGD LCWAAGDQQA RGFLIGGTSG RTTLNGEGLQ HEDGHSHIQS LTIPNCISYD
PAFAYEVAVI MHDGLHRMYG EAQENIYYYI TTLNENYHMP AMPQGAEEGI RKGIYKLETV
EGSKGKVQLL GSGSILRHVR EAAQILAKDY GIGSDVFSVT SFTELAREGQ DCERWNMLHP
TETPRVPYVA QVLSDAPAVA STDYMKLFAE QIRNFIPASD YRVLGTDGFG RSDSRENLRH
HFEVDASYVV VAALGELAKR GEIDKKVVAD AITKFNIDAD KVNPRLA