| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3519 |
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| Symbol | |
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| ID | 8134499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3963197 |
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| End bp | 3964612 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644866820 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003019071 |
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| Protein GI | 253689881 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATGC AGCAACTGAA GCCAAGCAGA GAACATGATG CACCGCTCTA TTTACAGTTG
TATCGACGCT ACCGCGACGC CATTACCGCC GGAAAACTTC ATCCGGGCGA TCGCGTGCCG
TCCGTGCGCA GCCTCGCCAG TGAGCTAAAT CTGGCACGCG GCACGGTCGA AATGGCTTAT
CAGATGCTGG CCAGTGAAGG CTATTTCCTG ACACGCGGCC CAGCAGGAAC CATCGTCTCA
CCCCGGCTGG AAAATCTGGG CGAGTCGGGA CACATCGCCA CATCCCTTTC TCAAATACCC
ACGCGCCCGC AGACCGAAGC AGAGCAAGTA CAACCTTTCC AACTCGGTTT ACCAGCACTG
GATGCCTTTC CCCGCAAGAG CTGGGCGCGC CTTGCCGGAC ACAATTTACG TACTCTGGAT
ACGGCAGCCA TGATCTATCC CGATCCGGCG GGGTATGAAC CACTTCGCCG CGCCATCGCG
ACCTATCTGG GAATCTCGCG CGGTATCACT TGCACATACG AGCAGGTGTT CATCACCGCA
GGCTACCGGG GAGCGCTGGA ACTGGTGTGT CGCACGTTGT TGCAACCCGG TGATAGTGGA
TGGTTCGAGG AGCCCGGCTA TCTCTTTGCG CGCCAGTTTT TGGAGCGAGC AGGTATGCAT
CTGGAACCCG TTCCAGTGGA TGAGGAAGGC CTGAATGTGG ACATGGGTCA ACAACGAGCC
GCAGAGGCAC GTTTTGCCGT AGTGACCCCC ACACACCAAA GCCCCATGGG CGTGGCGTTG
TCTTTACCCC GACGACTACA GCTATTGGAA TGGGCCAGCC ACCGCCGATC GTGGATCATT
GAGGACGACT ACGACAGCGA GTTCCGTTAC CACGGCCGGC CATTGCCGGC GCTGAAAAGT
CTGGATCGCG ACGGGCGCGT GCTCTATACC GGCACCTTCA GCAAGGTGCT TTTTCCCGGC
CTACGCTTAG CCTATCTGGT TGTCCCTGAA CCGCAAATCG AGCGCTTCAA GGATACGGCA
AATCACTTTT GCTGCCCCGG TTCGATCTTG CCTCAGGCCA CGGTGGCGGC TTTCATGGAG
CAAGGTCACT TTGCCCGCCA TTTGCGCAGA ATGCGTTCAC TGTATGCGAT TCGCCGCGGC
TATCTCGTCG ATGAGCTGCT CCAGACATTA GGTTCACACC TGATCGTCCA GCCGCAAGCG
GGCGGTATTC ATGTGTTAGC TAAGTTGGCC GCCCGTGGCA ACGATCAGTC TCTGGCAGCT
GCGGCGCAAT CTCATGGTCT TGCCATTCAG GCGCTGAATG ACTGGCGAAT GAGCAGGTCA
TCACACGGTG GGCTGCTGAT GGGATTCACT AATGTGACCG AACCTGCGAT GGCGAAGGCG
TTGGTACATC GACTGGCCGT TGCCATCGGG TTATGA
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| Protein sequence | MDMQQLKPSR EHDAPLYLQL YRRYRDAITA GKLHPGDRVP SVRSLASELN LARGTVEMAY
QMLASEGYFL TRGPAGTIVS PRLENLGESG HIATSLSQIP TRPQTEAEQV QPFQLGLPAL
DAFPRKSWAR LAGHNLRTLD TAAMIYPDPA GYEPLRRAIA TYLGISRGIT CTYEQVFITA
GYRGALELVC RTLLQPGDSG WFEEPGYLFA RQFLERAGMH LEPVPVDEEG LNVDMGQQRA
AEARFAVVTP THQSPMGVAL SLPRRLQLLE WASHRRSWII EDDYDSEFRY HGRPLPALKS
LDRDGRVLYT GTFSKVLFPG LRLAYLVVPE PQIERFKDTA NHFCCPGSIL PQATVAAFME
QGHFARHLRR MRSLYAIRRG YLVDELLQTL GSHLIVQPQA GGIHVLAKLA ARGNDQSLAA
AAQSHGLAIQ ALNDWRMSRS SHGGLLMGFT NVTEPAMAKA LVHRLAVAIG L
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