| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3489 |
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| Symbol | |
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| ID | 8134469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3934871 |
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| End bp | 3935752 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644866790 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_003019041 |
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| Protein GI | 253689851 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.383942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAT CTATCGCTTT TACCGTATCT TTACTCGCTG CATCGCTGGG TCTGGCTTCT
GCTGCTAACG CCGCAGAGTT AAAAATCGAT GTGTTTAATC CAGGTGAAGC CAGCGTATTC
CCAGTTTCCT CCGAAATTAT CAGCGGAGAT AAAGAAGTTG CCTTGATCGA TGCGCAGTTC
CAACGTAACG ATGCTCAGAC GCTGGTTGAG CGCATCAAAG CCACCGGAAA AAAACTGACC
ACCGTGTATA TCAGCCATTC CGACCCTGAC TATTACTTCG GTCTGGACGT GATCAAAGCC
GCTTTCCCGG ATGCTAAAAT CATTGCTACT CAGGCAACCA TCGACGCAAT CAACGCCAGC
AAAGACGGCA AAGTGGCGCA TTGGGGCCCC GTTCTGAAAG AAAACGCGCC GAAAGAGATC
GTGGTTCCTC AACCGCTGGA AGGCGATAGC TTCACCGTTG ACGGCAAAAA ACTGGAAGTA
AAAGGGCTGA AAGGGCCAAC GCCAGATCGT ACCTTCGTCT GGATCCCGTC GCTGAAAGCT
GTTGTCGGTG GTATTCCAGT CTCTGCCAAC ATCCACGTCT GGCTTGCCGA TACCCAAACG
CCAGAATCTC GCGTTCACTG GCGTGAAACG CTGAAATCCA TTGAAGCGCT GAAGCCGACC
ACCGTCGTAC CGGGTCATTT CATCGCACCA ACCGATTACA CGCTGAAGAA TGTGACCTTC
ACGCTGCAAT ATCTGGATAC CGTGGAGAAA GAGCTGGCAA AAACCAAAAA CTCTGCCGAG
CTGATCGCCG CAATGAAAAA ACACTACCCA ACGCTGAAAG AAGAATCTGG TCTTGAACTG
AGCGCCCAGG TTCTGAAAGG TGAAATGAAG TGGCCACAGT AA
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| Protein sequence | MSKSIAFTVS LLAASLGLAS AANAAELKID VFNPGEASVF PVSSEIISGD KEVALIDAQF
QRNDAQTLVE RIKATGKKLT TVYISHSDPD YYFGLDVIKA AFPDAKIIAT QATIDAINAS
KDGKVAHWGP VLKENAPKEI VVPQPLEGDS FTVDGKKLEV KGLKGPTPDR TFVWIPSLKA
VVGGIPVSAN IHVWLADTQT PESRVHWRET LKSIEALKPT TVVPGHFIAP TDYTLKNVTF
TLQYLDTVEK ELAKTKNSAE LIAAMKKHYP TLKEESGLEL SAQVLKGEMK WPQ
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