| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3488 |
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| Symbol | |
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| ID | 8134468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3933855 |
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| End bp | 3934763 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644866789 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003019040 |
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| Protein GI | 253689850 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.404534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCGCA TTACGGCGGC TGAAGTATTT GTGACTATTA TAGACCGCGG CAGCATGATC
GCGGCGGCAG AGACGCTGGA CATGTCTCGA GCAATGGTGA CGCGCTATCT GGCAGAGATG
GAAGCGTGGG CGGGGGCGCG GTTATTGCAC CGTACGACGC GCAAACTGAG CCTGACGGAT
GCCGGGGAAA AAACGCTGGC GCGCTGTCGA GAGATGCTGG CGCTGACGGC GGATATGCGC
ATCGAGGCCG ATACCGACGA TGCCACGTTA AGCGGTTTGC TACGCCTTAG CTGCTCACAA
TCGTTGGCGC AGGGGGCGCT CGGCATGGCG ATCACGACGT TTCTAAGGCA CCATCCTCGG
GTTGCTATCG ATCTGCAAAT GAATAACCGC GCGGTGAATT TGGTCGAGGA GCGTATCGAT
CTGGCGCTGC GCATTACCAA CGAACTGGAT CCCAATCTGA TTGCCCGACC GCTGGCACGC
TGTGAGTCGG TGCTGTGTGC ATCGCCCTCT TATCTGAATG AGCACGGTAT TCCGCGACAG
CTGACCGATC TCTCGATTCA CAACTGCCTG ACCTATACCT ATTTCGGCAA AAGCCTGTGG
CATTTTTCCC GCGATGATGA AAAGTTTACG ATTCCCGTCA GCGGTAACCT GAGCGGCAAT
GAATCGCTGG TGCTGCTGGC GGGCGCGCTG GAAGGGGCGG GGATCGCGCT GCAACCGCGC
TATTCTGTGA CGCCTTATCT CGCGACGGGA CAACTGGTGG CGCTGTTGCC GGAATACCGT
CCGCAGGCGA TGGGGATTTA TGGCATTTAC ACCTCGCGCC GCCAGATGCC TGCCGCGCTG
CGTACCCTAC TGGATTTTCT GGTGGACTGG TTTGCTCACG ATCCGCGCTG GCGTGCGTTG
ACGCAGTGA
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| Protein sequence | MDRITAAEVF VTIIDRGSMI AAAETLDMSR AMVTRYLAEM EAWAGARLLH RTTRKLSLTD
AGEKTLARCR EMLALTADMR IEADTDDATL SGLLRLSCSQ SLAQGALGMA ITTFLRHHPR
VAIDLQMNNR AVNLVEERID LALRITNELD PNLIARPLAR CESVLCASPS YLNEHGIPRQ
LTDLSIHNCL TYTYFGKSLW HFSRDDEKFT IPVSGNLSGN ESLVLLAGAL EGAGIALQPR
YSVTPYLATG QLVALLPEYR PQAMGIYGIY TSRRQMPAAL RTLLDFLVDW FAHDPRWRAL
TQ
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