Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3474 |
Symbol | |
ID | 8134454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3919000 |
End bp | 3919905 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644866775 |
Product | ABC transporter periplasmic substrate-binding protein |
Protein accession | YP_003019026 |
Protein GI | 253689836 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.586797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTCCA CTATCATTCA TGCCCCCACG GGGGACGGCT CAAAGGCCAC GCTCAGAGCC TACAGCTCTT TTGAACCCTA TGAACTTGCC GATTATCTGC AAGCGCTCGC GCATCATATG CCTGATGTGG CGATCCACAT TGAAAGAATG CCGACGGCAG CGCTGACGGC AAGACTGGCT CAGGAACAGT ACGCTCCTCA GGTGGATATG ATTCTGGGGT GGGCGGATAC CGCCTCGCGC ACCCTTGATT TAAGCGGTGT GCTATTTGCT CCGGGCGCTG ACGCCGATGG ATACCTGCGC ATCACCGGGT TTTCAACCGC GATCGTTGTC GATCCTGCTG TCCTCTCCGA AACGGGCGTG GACATCGCAT CATGGGTCGA TCTTACCCAG TCAGCCCTTC AGGGGCGGAT TGCGTTTCCC GATCCGGCTG TATCGGGCGC AGGGTTTCTG GCTCTGGCGA CGATTCTGCA ATTCTATGGC GAAACCGAGG GCTGGGCGAT CCTCGCTGAT ATTTATCGCA ATGCACACAT CAGGCCGCCT TCCGCGTGGG AACCCGCCCG GCTGACCGGA GAAGGGCAGA TCGCGGCTGG CGTAACGGTA AAAATAGCGG CCTCAAATCG GCAGCGGGAA CGTCCCTCTC TGCACATCGT TGAGCCACAG GATGCGATCG GCATTGAATC CGAGGTTTTT GCTGGCTTTA CCACGACCCG TCACCCTTCG CTGGTCACTC AGGCACTGGA ATGGCTCAGG TCAGAAGAAG CGGAAGGGAT TTATGCCAGC TACAACAAAA TTATTCTCGG AAAACCGGAT AGCCGGCTAT TTGTTATTGA TGCTGAAAAC GCGGTAAAAA ACCGAACCCG CTGGTTGTCC CAGCTTGAAT TCATTGCAAA CGGTAATCAC CTATGA
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Protein sequence | MASTIIHAPT GDGSKATLRA YSSFEPYELA DYLQALAHHM PDVAIHIERM PTAALTARLA QEQYAPQVDM ILGWADTASR TLDLSGVLFA PGADADGYLR ITGFSTAIVV DPAVLSETGV DIASWVDLTQ SALQGRIAFP DPAVSGAGFL ALATILQFYG ETEGWAILAD IYRNAHIRPP SAWEPARLTG EGQIAAGVTV KIAASNRQRE RPSLHIVEPQ DAIGIESEVF AGFTTTRHPS LVTQALEWLR SEEAEGIYAS YNKIILGKPD SRLFVIDAEN AVKNRTRWLS QLEFIANGNH L
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