Gene PC1_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3466 
Symbol 
ID8134446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3911056 
End bp3911823 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content55% 
IMG OID644866767 
ProductGntR domain protein 
Protein accessionYP_003019018 
Protein GI253689828 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAAGG ATGTGGTTCT GCAAGAGAAG AAGCAATATC AGGAAATCGG CTGTGATTTA 
CGTCAGAAGA TTCAGTCAGG GGATTACCCC GTTGGATCGC GCCTTCCTCC TGAACGAAAT
ATTGCGGAAA CTTATGGCGT TAGCCGGACG ATAGTGCGCG AAGCGCTGCT GATGCTTGAG
CTGGAAGGCA CGGTCGATAT TCGTCAGGGC TCCGGGGTGT ATGTCCTGCG CATTCCCGAT
GAAGACGACA CGGCTGACGG CGCTAAAAAC CATATCGGCG CGTTTGAAAT GCTACAGGCA
CGTCAACTGC TGGAAAGCAA CATTGCGGCG TTTGCGGCAC GCATGGCGAC GCGGGCGGAT
ATTGAAAACC TGCGCAAGAC GCTGGAGCAA GAGCAGGCGG CGATTGCCGT AAAAGATTAC
CGTGGTGATT TCGATCGCCT GTTCCACCTG CAAATTGCCG GGGCGACACA AAACCAGATG
CTGCTGGAAA CGGTCAGCAA TATCTGGGCG TGCCGCGACG ATAACGCGCT CTGGCAGCAG
CTTTATACCC ACGTCGGGAC GCAGGGCTAT CGCCTGAAAT GGCTGGCGGA TCATCAGGCT
ATTCTGGCGG CGCTGCGGCG TCGCGATGTG TCCGGTTCTT ATCAGGCCAT GTGGCAGCAC
CTCGAAAATG TCAAAAATAC GCTGATGGAA ATCTCTGACG CCGATGCCCC GGAGTTTGAC
GGCTATTTAT TTGATTCTGT GCCGATTTTT CAGGGGAAGT TGGTGTAA
 
Protein sequence
MAKDVVLQEK KQYQEIGCDL RQKIQSGDYP VGSRLPPERN IAETYGVSRT IVREALLMLE 
LEGTVDIRQG SGVYVLRIPD EDDTADGAKN HIGAFEMLQA RQLLESNIAA FAARMATRAD
IENLRKTLEQ EQAAIAVKDY RGDFDRLFHL QIAGATQNQM LLETVSNIWA CRDDNALWQQ
LYTHVGTQGY RLKWLADHQA ILAALRRRDV SGSYQAMWQH LENVKNTLME ISDADAPEFD
GYLFDSVPIF QGKLV