| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3455 |
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| Symbol | |
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| ID | 8134435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3900429 |
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| End bp | 3901571 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644866756 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_003019007 |
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| Protein GI | 253689817 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.766268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTAAGC TTCCCCCGCT CAGCCTGTAC ATCCATATTC CGTGGTGCGT ACAGAAATGT
CCGTACTGCG ATTTCAACTC TCACGCGCTG AAAGGCGACG TGCCGCATCA GGAATATGTC
GATCACCTGC TGGCGGATCT GGATGCCGAT TTGCCGCTGG CGAGCGGTCG TGAACTGCAC
TCGATCTTTA TCGGCGGCGG TACGCCCAGC CTGCTGAGCG CGGAAGCGAT GCAGGCGCTG
CTCGACGGCG TTCGGGCAAG AATTCCGCTA ACACCGGATG CCGAAGTTAC GATGGAAGCC
AATCCCGGAA CGGTTGAAGC CGATCGTTTC AGCGGCTATC AACGCGCAGG CATTAACCGT
ATCTCCATCG GCGTGCAGAG TTTCGATCCA CAAAAGCTGA CGCGCTTAGG GCGTATTCAC
GGCCCAGACG AAGCCAAGCG CGCTGCGCAC CTGGCGACCG GTCTGGGATT ACGCAGCTTT
AATCTGGATC TGATGCACGG CCTACCGGAT CAATCGCTGG ACGAAGCGCT GGACGACCTG
CGTCAGGCCA TCGCGCTCAA TCCACCACAT CTGTCCTGGT ATCAACTCAC CATCGAGCCG
AATACGCTGT TTAGCTCGCG TCCGCCGACG CTGCCGGACG ACGATGCGCT GTGGGATATC
TACGAGCAGG GCCACGCGCT ACTGAGCGCC GCCGGTTACC AGCAATATGA AACCTCTGCC
TATGCCAAAC CGGGCTATCA GTGCCAGCAC AACCTGAACT ACTGGCGTTT CGGAGACTAT
TTGGGAATTG GCTGCGGGGC ACACGGCAAG CTGACCTTCA GCGATGGGCG CATTCTGCGC
ACGGTAAAAG TCCGCCATCC GCGTGGCTAT ATGCAGGGCA CGTATCTGGA TAAGCAACAC
GACGTCGCCA ACGACGATCG GCCTTTTGAA TTCTTCATGA ACCGCTTTCG CCTGCTGGAA
GCCGCTCCAC GCGCGGATTT CACGGCGTAC ACCGGTCTGG AAGAGCACTG CATCCGCCCG
CAGTTGGATC AGGCACTGGC GCAAGGCTAT CTGACGGAAA CCGCCACGCA CTGGCAAATC
ACCGAACACG GTAAACTGTT TCTGAACTCC CTGCTGGAGC TGTTTCTGGC GGAAGAAGAG
TAA
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| Protein sequence | MLKLPPLSLY IHIPWCVQKC PYCDFNSHAL KGDVPHQEYV DHLLADLDAD LPLASGRELH
SIFIGGGTPS LLSAEAMQAL LDGVRARIPL TPDAEVTMEA NPGTVEADRF SGYQRAGINR
ISIGVQSFDP QKLTRLGRIH GPDEAKRAAH LATGLGLRSF NLDLMHGLPD QSLDEALDDL
RQAIALNPPH LSWYQLTIEP NTLFSSRPPT LPDDDALWDI YEQGHALLSA AGYQQYETSA
YAKPGYQCQH NLNYWRFGDY LGIGCGAHGK LTFSDGRILR TVKVRHPRGY MQGTYLDKQH
DVANDDRPFE FFMNRFRLLE AAPRADFTAY TGLEEHCIRP QLDQALAQGY LTETATHWQI
TEHGKLFLNS LLELFLAEEE
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