Gene PC1_3392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3392 
Symbol 
ID8134372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3830074 
End bp3831219 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content55% 
IMG OID644866693 
Productglycerate kinase 
Protein accessionYP_003018944 
Protein GI253689754 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1929] Glycerate kinase 
TIGRFAM ID[TIGR00045] glycerate kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG TGATCGCACC GGATTCTTAT AAAGAAAGCC TGTCTGCACA AGAAGTTGCT 
ACGCAGATTG AAAAGGGATT TCGTGAAATA TTTCCCGATG CCTGCTATGT CAAATTGCCC
GTTGCAGATG GTGGGGAAGG CACAGTTGAA GCGATGGTCG CTGCGACCGA TGGCAAGATT
GTGAATGTTA AAGTGACAGG ACCGTTAGGC GATAGCATCG ACGCGTTTTT TGGCCTGTCT
GGCGATGAAA AAACGGCTTT TATTGAGATG GCGGCGGCAA GCGGTCTGGA GCGAGTGCCT
TCGCAGTTGC GTAATCCATT AAAGACAACC AGCTACGGCA CGGGCGAACT GATTCGCTGC
GCATTAGATT ACGGCATTCG GCACTGCATC ATCGGGATTG GCGGAAGCGC AACCAATGAC
GGCGGGTCGG GCATGGTGCA GGCGCTGGGC GCCAGGCTGC TGGATAAGCA GGGCGAGCAG
ATCGGTTTTG GCGGGGGTGA ACTCGACAAA CTCGCTCGCA TTGATATCAG CGAACTGGAT
GAGCGTATTA AAGGCTGTCG TTTTGAAGTG GCCTGTGATG TGACCAACCC GCTGACGGGG
AAACAGGGCG CATCGGCGAT TTTTGGCCCT CAGAAAGGTG CGACGCCGGA GATGATTGAA
CAGTTGGATA ATGCGCTGAA GCATTATGCG GCGGTGATTC GCCACGATCT GGATATGGAC
GTGGAACACG TTCCCGGTGC GGGGGCGGCG GGCGGTATGG GCGCAGCGCT ACAGGCTTTT
TGCGGCGCTG AACTGCGTCA GGGCATTGAG ATTGTCACGG AAGCGTTAGG GCTGGATGAA
CTGGTACGGG ATGCTACGCT GGTGATTACC GGAGAAGGGC GCATCGATAG CCAGACGATC
CACGGTAAGG TGCCGATTGG CGTGGCGCGA GTCGCCAAAC AGTATAATAA ACCGGTCATT
GGCATTGCGG GCAGCCTGAC GGCAGATGTC GGCGTGGTAC ATGAACATGG TCTGGACGCG
GTATTCAGCG TGCTTTACAA CATCTGTTCA CTAGAAGAAG CGCTGGATAA TGCGGCAGAA
AATGTGCGTA TGGCGGCACG CAATATCGCT GCGACGATCC GGCTGGCGCA GTCAATGTCG
CGTTGA
 
Protein sequence
MKIVIAPDSY KESLSAQEVA TQIEKGFREI FPDACYVKLP VADGGEGTVE AMVAATDGKI 
VNVKVTGPLG DSIDAFFGLS GDEKTAFIEM AAASGLERVP SQLRNPLKTT SYGTGELIRC
ALDYGIRHCI IGIGGSATND GGSGMVQALG ARLLDKQGEQ IGFGGGELDK LARIDISELD
ERIKGCRFEV ACDVTNPLTG KQGASAIFGP QKGATPEMIE QLDNALKHYA AVIRHDLDMD
VEHVPGAGAA GGMGAALQAF CGAELRQGIE IVTEALGLDE LVRDATLVIT GEGRIDSQTI
HGKVPIGVAR VAKQYNKPVI GIAGSLTADV GVVHEHGLDA VFSVLYNICS LEEALDNAAE
NVRMAARNIA ATIRLAQSMS R