Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3392 |
Symbol | |
ID | 8134372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3830074 |
End bp | 3831219 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644866693 |
Product | glycerate kinase |
Protein accession | YP_003018944 |
Protein GI | 253689754 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1929] Glycerate kinase |
TIGRFAM ID | [TIGR00045] glycerate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG TGATCGCACC GGATTCTTAT AAAGAAAGCC TGTCTGCACA AGAAGTTGCT ACGCAGATTG AAAAGGGATT TCGTGAAATA TTTCCCGATG CCTGCTATGT CAAATTGCCC GTTGCAGATG GTGGGGAAGG CACAGTTGAA GCGATGGTCG CTGCGACCGA TGGCAAGATT GTGAATGTTA AAGTGACAGG ACCGTTAGGC GATAGCATCG ACGCGTTTTT TGGCCTGTCT GGCGATGAAA AAACGGCTTT TATTGAGATG GCGGCGGCAA GCGGTCTGGA GCGAGTGCCT TCGCAGTTGC GTAATCCATT AAAGACAACC AGCTACGGCA CGGGCGAACT GATTCGCTGC GCATTAGATT ACGGCATTCG GCACTGCATC ATCGGGATTG GCGGAAGCGC AACCAATGAC GGCGGGTCGG GCATGGTGCA GGCGCTGGGC GCCAGGCTGC TGGATAAGCA GGGCGAGCAG ATCGGTTTTG GCGGGGGTGA ACTCGACAAA CTCGCTCGCA TTGATATCAG CGAACTGGAT GAGCGTATTA AAGGCTGTCG TTTTGAAGTG GCCTGTGATG TGACCAACCC GCTGACGGGG AAACAGGGCG CATCGGCGAT TTTTGGCCCT CAGAAAGGTG CGACGCCGGA GATGATTGAA CAGTTGGATA ATGCGCTGAA GCATTATGCG GCGGTGATTC GCCACGATCT GGATATGGAC GTGGAACACG TTCCCGGTGC GGGGGCGGCG GGCGGTATGG GCGCAGCGCT ACAGGCTTTT TGCGGCGCTG AACTGCGTCA GGGCATTGAG ATTGTCACGG AAGCGTTAGG GCTGGATGAA CTGGTACGGG ATGCTACGCT GGTGATTACC GGAGAAGGGC GCATCGATAG CCAGACGATC CACGGTAAGG TGCCGATTGG CGTGGCGCGA GTCGCCAAAC AGTATAATAA ACCGGTCATT GGCATTGCGG GCAGCCTGAC GGCAGATGTC GGCGTGGTAC ATGAACATGG TCTGGACGCG GTATTCAGCG TGCTTTACAA CATCTGTTCA CTAGAAGAAG CGCTGGATAA TGCGGCAGAA AATGTGCGTA TGGCGGCACG CAATATCGCT GCGACGATCC GGCTGGCGCA GTCAATGTCG CGTTGA
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Protein sequence | MKIVIAPDSY KESLSAQEVA TQIEKGFREI FPDACYVKLP VADGGEGTVE AMVAATDGKI VNVKVTGPLG DSIDAFFGLS GDEKTAFIEM AAASGLERVP SQLRNPLKTT SYGTGELIRC ALDYGIRHCI IGIGGSATND GGSGMVQALG ARLLDKQGEQ IGFGGGELDK LARIDISELD ERIKGCRFEV ACDVTNPLTG KQGASAIFGP QKGATPEMIE QLDNALKHYA AVIRHDLDMD VEHVPGAGAA GGMGAALQAF CGAELRQGIE IVTEALGLDE LVRDATLVIT GEGRIDSQTI HGKVPIGVAR VAKQYNKPVI GIAGSLTADV GVVHEHGLDA VFSVLYNICS LEEALDNAAE NVRMAARNIA ATIRLAQSMS R
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