| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3391 |
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| Symbol | |
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| ID | 8134371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3827171 |
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| End bp | 3829966 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866692 |
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| Product | hybrid sensory histidine kinase BarA |
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| Protein accession | YP_003018943 |
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| Protein GI | 253689753 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAT ACAGTCTTCG TGCACGGATG TTGATACTGA TTTTGGCACC GACGCTGATG
ATCGGGCTGC TGCTCAGTTC GTTCTTCGTT ATCCATCGTT ACAATCAGTT GCAGTCGCAG
TTGGCTGATT CGGGCACCAG CATCATTGAA CCGCTGGCGA CCATCAGCGC TTACGCCATT
ACCCATCGTC AGATGGACAC GATTCCCGCG TTAATCAATA CGCTGCATCG TCGGCACTCC
ACGATTATTC GTACCATTAG CGTGTTCGAT GCGCGCAATC AGCTATTGGC TACCACCAAC
GTACGCAACA ACGTGACATT GCAACCACTC AGCAGCGATG CGCCTTCCTA CAATAAACTG
CACCTGCACC ACACGAATGA CGCGCTGATT CTGCATATGC CGATCGTCAA TGACAGCGAA
TTTATGCCAA GTGGGACGCC GCCGGTGTTG CCCAGCACCG CCACGCCTCT CGGCTATCTG
GTGATCGAAC TGGACACCAG CGCTATTCGG CTTCAACAGT ATCAGGAAAT ATTCATCGCC
ACGCTCTTGC TGCTGCTATC GTTGGGTGCC GCCGTCCTCT TTGCCTATCG TCTGATGCGG
GATGTCACCA CCCCGATTCG TAATATGGTT GATACCGTCG ATCGCATTCG CCGTGGGCAG
TTGGATAGCC GCGTAGAAGG ATACATGCTG GGCGAGTTGG ATATGTTGAA AAACGGCATC
AACTCAATGG CGATGTCGCT GACCGCCTAC CACGAAGAGA TGCAGCAAAA TATCGATCAG
GCGACCTACG ATCTGCGCGA AACGCTGGAG CAGATGGAGA TCCAGAACGT CGAACTGGAT
CTGGCCAAAA AGCGGGCGCA GGAGGCAGCA CGCATCAAAT CAGAGTTTCT GGCCAATATG
TCACACGAAC TGAGGACGCC GCTGAATGGC GTGATCGGTT TCACGCGCCA GACGTTGAAG
ACTCCGTTGA ACACCACACA GACTGACTAT CTGCTTACCA TCGAACGCTC CGCCAATAAC
CTGCTGAATA TCATTAACGA CGTGCTGGAT TTTTCGAAAC TGGAAGCCGG AAAATTGGTG
CTGGAGGATA TTCCGTTCTC GCTACACAAC GCGCTGGACG ATGTTGTGAT GCTGTTGGCG
CACACGGCAC ATGAAAAAGG ATTGGAGCTG ACGCTCAGTA TTCAGAATGA CGTGCCCGAG
CAGTTTGTCG GCGATCCGCT ACGGATACAG CAAATCATCA CCAACCTGCT GGGCAACGCG
ATTAAATTTA CCGAGCAAGG CAACATTGAT ATTCGGGTAG AGAAGCGTCG GCAGGAACAT
CATCAGGTCC AGCTCGAGGT GCAAATACGC GATACCGGTA TCGGCATTGC CGAGTTGCAG
CAATCTCAAC TGTTCCAGGC GTTCCGTCAG GCTGACACCA GTATTTCACG CCGTCATGGT
GGCACGGGGC TTGGGCTGGT CATCACCCAA CGTTTGGTCA AAGAGATGGG CGGCGATATC
AGCTTCCAGA GCCAGCTCAA CAAGGGATCG ACCTTCTGGT TCCATATCAC GCTGCCACTC
AACCCTCACG CCATACCGAC AGAACCGGCC TACACGATGC TGCAAGGCAA ACATCTGGCC
TACGTCGAAT ACCATCCCAT CGCCGCGCAA GCTACGCTGG ATATCCTGAG CCAAACACCG
CTCATCGTGA GCTACAGCCC GACGTTTGAG CAACTGCCGG AAGGGGAATT CGATATCCTG
CTGCTCGGCG TTCCCGTGCA ATATCGCAAC ACACTGCTCG ACTACACGCC CAGACTGCGC
GACATCTGCC GCCGCGCGCC CTGCGTGATT CTGGCGCTGC CCAGCCTGGC GCAAATGGAT
GCCGAACAGT TGAAAACCTT CGGCGTACAT GCCTGTCTGA GCAAACCACT CGCCGCACCG
CGCCTGCTGC CACTGTTACA GGACAGCACG CTGTTCCAGC TCTCTTTCCT GCCGGATGAG
ACGGTGTCTC ACCCGAGTGC CATACGCCAT CCAGCTCGTC TGCCACTGAG CGTGATGGCG
GTGGATGATA ATCCGGCTAA TCTGAAACTG ATCGGCACGC TGCTGGAAGA GCAGGTCGAG
ACGATTATCC TGTGCGAAAG TGGTCAGGAT GCGATTGCAC AGGCGAAACT GCATCAGTTC
GATATCATCC TCATGGATAT TCAGATGCCG GGTATGGACG GCATTTGCGC CAGCGAGCTG
ATCCGTCAGA TCCCTCATCA TGCCACTACG CCTATCATCG CGGTGACGGC GCAAACCATG
ACGGGTGAAC GTGAACATTT GCTACGTTCA GGTATGGATG ACTATCTGGC TAAACCGATA
GACGAACAGA TGCTGAAAAG CGTGCTAACG CGCCATGCGC GGAAGGATCC GCTGAAGCGC
GAACGGGGCG ATATAACGGG ATTATTGAGC GAGCATGACG ATAGTCATCT GTCTCTCGAC
TGGGCGCTGG CGCAACAACA GGCGGCCAAC AAGCCTGAAT TGGCGCGTGA CTTGCTGCAA
ATGCTGTTGG ATTTCTTGCC GGAGGTTCAG CAGAAGATAG AAAACGTCCT GAAGGGTCAG
ACGGATGACG ACATTATCGA ACTGATTCAT AAACTGCACG GCAGTTGTAG CTACAGCGGC
GTTCCGCGTC TGAAACGCAT TTGCCGCTAT CTGGAGCAGC AGTTGCGTAA AGGCGTTCAC
GCCAGCGATT TGGAACCCGA ATGGCTGGAA CTACTGGACG AAATCGACAA CGTCAACAAA
GCCGCTCAGC CGCATATCAA GCCGCTACTT CCGTAA
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| Protein sequence | MTKYSLRARM LILILAPTLM IGLLLSSFFV IHRYNQLQSQ LADSGTSIIE PLATISAYAI
THRQMDTIPA LINTLHRRHS TIIRTISVFD ARNQLLATTN VRNNVTLQPL SSDAPSYNKL
HLHHTNDALI LHMPIVNDSE FMPSGTPPVL PSTATPLGYL VIELDTSAIR LQQYQEIFIA
TLLLLLSLGA AVLFAYRLMR DVTTPIRNMV DTVDRIRRGQ LDSRVEGYML GELDMLKNGI
NSMAMSLTAY HEEMQQNIDQ ATYDLRETLE QMEIQNVELD LAKKRAQEAA RIKSEFLANM
SHELRTPLNG VIGFTRQTLK TPLNTTQTDY LLTIERSANN LLNIINDVLD FSKLEAGKLV
LEDIPFSLHN ALDDVVMLLA HTAHEKGLEL TLSIQNDVPE QFVGDPLRIQ QIITNLLGNA
IKFTEQGNID IRVEKRRQEH HQVQLEVQIR DTGIGIAELQ QSQLFQAFRQ ADTSISRRHG
GTGLGLVITQ RLVKEMGGDI SFQSQLNKGS TFWFHITLPL NPHAIPTEPA YTMLQGKHLA
YVEYHPIAAQ ATLDILSQTP LIVSYSPTFE QLPEGEFDIL LLGVPVQYRN TLLDYTPRLR
DICRRAPCVI LALPSLAQMD AEQLKTFGVH ACLSKPLAAP RLLPLLQDST LFQLSFLPDE
TVSHPSAIRH PARLPLSVMA VDDNPANLKL IGTLLEEQVE TIILCESGQD AIAQAKLHQF
DIILMDIQMP GMDGICASEL IRQIPHHATT PIIAVTAQTM TGEREHLLRS GMDDYLAKPI
DEQMLKSVLT RHARKDPLKR ERGDITGLLS EHDDSHLSLD WALAQQQAAN KPELARDLLQ
MLLDFLPEVQ QKIENVLKGQ TDDDIIELIH KLHGSCSYSG VPRLKRICRY LEQQLRKGVH
ASDLEPEWLE LLDEIDNVNK AAQPHIKPLL P
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