| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3389 |
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| Symbol | relA |
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| ID | 8134369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3823307 |
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| End bp | 3825541 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866690 |
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| Product | GDP/GTP pyrophosphokinase |
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| Protein accession | YP_003018941 |
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| Protein GI | 253689751 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000633248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGCGG TAAGAAGTGC GCATTTGAAT ACGGCAGGTG AATTTGTCCC TGACGCGTGG
ATTGCTTCGC TGGGTATTTC CAGCCAGCAA TCATGTGAAC GTTTAGCCGA AACCTGGCGT
TACTGTGAGC AGCAAACGCA AGATCACTCC GATGCACCGC TACTGCTGTG GCGCGGCATT
GAAATGGTGG AAATCCTGTC CACGCTCAGT ATGGACAATG ACAGCATGCG CGCAGCGCTG
CTCTTTCCAC TGGCGGATGC AAACGTGGTC GATGAGGCCA CGCTGGAAGC CGCATTTGGT
AAAAACATCG TTGATTTGGT GCATGGCGTG CGCGATATGG ATGCAATTCG CCAGCTCAAA
GCAACGCAGA ATGACTCTGG CGCGTCTGAG CAGGTCGATA ATATCCGTCG CATGTTGCTG
GCGATGGTGG AAGATTTCCG CTGCGTGGTC ATCAAGCTCG CCGAGCGGAT CGCCCACCTG
CGTGAAGTGA AAGATGCCCC GGAAGAAGAA CGGGTATTGG CGGCCAAAGA GTGTACCAAT
ATCTACGCGC CGTTGGCGAA CCGCTTGGGC ATCGGGCAGT TGAAGTGGGA ACTGGAAGAT
TTCTGCTTCC GCTACCTGCA CCCGGATGAA TATAAAAAAA TCGCCAAACT GCTGCACGAG
CGCCGTATCG ATCGTGCTCA GTATATTGAT GATTTTGTTA AAACGCTGCG CGATGCGATG
AAAGAAGAGG GCGTGCAGGC AGAGATTTAC GGCCGTCCCA AGCATATTTA CAGCATCTGG
CGCAAGATGC AGAAGAAAGC GCTGTCGTTC GATGAGCTGT TTGATGTGCG TGCGGTGCGC
ATTGTCGTTG AGCGTTTGCA GGACTGCTAC GGGGCACTTG GGATTGTCCA TACCCATTAC
CGCCATTTGC CGGACGAGTT TGACGACTAC GTTGCCAACC CGAAACCGAA CGGTTATCAG
TCTATCCACA CTGTGGTGTT AGGGCCGGGC GGAAAGACGC TCGAAATTCA GATTCGTACG
CGCCAGATGC ATGAAGATGC CGAACTGGGC GTCGCGGCAC ACTGGAAATA TAAAGAAGGC
ACCGCCGTGG GCGGGCGTTC CGGCTACGAA GGCCGCATTG CCTGGCTGCG TAAACTGCTT
GCCTGGCAGG AAGAGATGGC CGATTCGAAC GACGTGCTGG ACGAAGTTCG CAGTCAGGTG
TTTGACGATC GCGTGTATGT CTTTACTCCG AAAGGCGACG TGGTGGATCT CCCCGCCGGC
TCCACACCGT TGGATTTTGC TTACCACATT CACAGCGATA TCGGGCACCG CTGCATCGGG
GCAAAAATCA GCGGGCGTAT TGTGCCGTTT ACCTATCAGC TGCAAATGGG CGATCAGATT
GAAATCATCA CCCAGAAGCA GCCGAATCCG AGCCGTGACT GGCTGAACCC GAATCTGGGG
TATATCACCA CCAGCCGCGG ACGCTCCAAG ATCCAGAACT GGTTCCGCAA GCAGGATCGC
GACAAGAATA TTCTGGCGGG ACGGCAGATT CTGGATGACG AACTGGCGCA TTTGGGGATC
AGCCTGAAAG CGGCGGAGAA ATTGCTGCTG CCGCGCTACA ACGTGAATTC GCTGGATGAA
TTACTGGCTG CTATCGGCGG CGGCGATGTT CGTCTGAACC AGATGGTGAA TTTCCTGCAA
TCGCAGTTAA AACAGCCGAG CGCGGAAGAA CTGGATCGTG AAGCACTGCG CCAGCTGACG
CAGAAATCGC AGCAGCCGCC AACGCGTACC CATAAAGATA ACGGTCGCGT GGTGGTCGAA
GGCGTCGGTA ACCTGATGCA CCATATCGCG CGCTGCTGCC AGCCGATTCC GGGCGATGAA
ATCACCGGGT TCATCACACG CGGTCGTGGG ATTTCGATTC ACCGCGCGGA CTGTGAACAA
CTGGATGAAC TTCGCGCCAG CTCGCCGGAG CGGATTGTGG ATGCGGTATG GGGCGAAAGC
TACTCCAGCG GTTATTCGCT GGTGGTGAGG GTGATTGCCA ACGATCGCAG CGGCCTCCTG
CGGGATATCA CCACGATTCT GGCGAATGAG AAGGTCAATG TACTGGGCGT CGCCAGCCGC
AGCGACACCA AACAGCAACT GGCAACGATT GATATGGACA TTGAGATCTA CAACCTGCAA
GTACTGAGCC GCATTCTGGC GAAGCTCAAC CAACTGCCGG ATGTGATCGA CGCGCGGCGC
CAGCAAGGGG CGTAA
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| Protein sequence | MVAVRSAHLN TAGEFVPDAW IASLGISSQQ SCERLAETWR YCEQQTQDHS DAPLLLWRGI
EMVEILSTLS MDNDSMRAAL LFPLADANVV DEATLEAAFG KNIVDLVHGV RDMDAIRQLK
ATQNDSGASE QVDNIRRMLL AMVEDFRCVV IKLAERIAHL REVKDAPEEE RVLAAKECTN
IYAPLANRLG IGQLKWELED FCFRYLHPDE YKKIAKLLHE RRIDRAQYID DFVKTLRDAM
KEEGVQAEIY GRPKHIYSIW RKMQKKALSF DELFDVRAVR IVVERLQDCY GALGIVHTHY
RHLPDEFDDY VANPKPNGYQ SIHTVVLGPG GKTLEIQIRT RQMHEDAELG VAAHWKYKEG
TAVGGRSGYE GRIAWLRKLL AWQEEMADSN DVLDEVRSQV FDDRVYVFTP KGDVVDLPAG
STPLDFAYHI HSDIGHRCIG AKISGRIVPF TYQLQMGDQI EIITQKQPNP SRDWLNPNLG
YITTSRGRSK IQNWFRKQDR DKNILAGRQI LDDELAHLGI SLKAAEKLLL PRYNVNSLDE
LLAAIGGGDV RLNQMVNFLQ SQLKQPSAEE LDREALRQLT QKSQQPPTRT HKDNGRVVVE
GVGNLMHHIA RCCQPIPGDE ITGFITRGRG ISIHRADCEQ LDELRASSPE RIVDAVWGES
YSSGYSLVVR VIANDRSGLL RDITTILANE KVNVLGVASR SDTKQQLATI DMDIEIYNLQ
VLSRILAKLN QLPDVIDARR QQGA
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