Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3365 |
Symbol | cysJ |
ID | 8134345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3792958 |
End bp | 3794787 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644866666 |
Product | sulfite reductase subunit alpha |
Protein accession | YP_003018917 |
Protein GI | 253689727 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.834699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACTC CGGTTTCCCC CACTTCATTG CTTCCGCTGA GTGCGGAGCA ATTAACGCGT TTACAGGCGG CAACCGGTGA TTTCTCATCG ACGCAGCTGG CCTGGCTATC CGGCTATTTC TGGGGGCTGG TACAACAGCC TGGGAACGTG CAGTCTAGTA CCACGATCGC CGCGGCGGCT ACCGCTTCCG CAGTAACGGT GCCGGTACAA ACCATCACGC TGATTTCTGC CTCACAGACC GGTAACGCAC GTCGGGTCGC GGAACAGCTG CGTGACGACC TGCTGGCAGC CAAGCTGTCC GTTAATCTGG TCAATGCGGG TGATTACAAG TTCAAGCAAA TCGGGCAGGA AAAACTGCTG CTGATCGTGA CCTCGACGCA GGGGGAAGGC GAGCCGCCGG AAGAAGCGGT CGCGCTGCAT AAGTTCCTGC TGTCCAAGAA AGCCCCGGCG CTGAAAGACA CCGCGTTTGC CGTGTTTGGT CTGGGTGATA CTTCTTACGA ATTCTTCAGC AAGGCGGGTA AGGATTTCGA TGACCGTCTG GCTGAGCTGG GCGCGGAGCG TCTGCTGGAT CGCGTTGATG CCGATGTCGA TTATCAGGCG CTAGCTGAAC AGTGGCGTCG CCAGCTGGTT GATATTTTGC AGGCGCGAGT GCCGGTTCAG GGTGAAGCCG TTGCGCAGAT TGCCGCTCAG GGCGCACTGG ATGAAATTAC CAGCAGCCCG TACAGCAAAT CCTCGCCGTT GCATGCCACA TTTGCGGTGA ATCAGAAAGT AACCGGGCGT GGTTCAGAAA AAGATGTGCG CCATATCGAG ATCGATCTGG GCGATTCCGG TTTGCGTTAT CAGCCGGGAG ACGCGCTGGG CGTGTGGTTT GATAACGATC CGGCACTGGT GCAGGAATTG CTGGAACTGC TGTGGCTGAA AGGCGATGAA TCCGTCAGCG TTGACGGTAA GACGCTGCCA TTATCGCAGG CGCTGAAAAG CCATTTTGAG CTGACGCAAA ACACCGCGCC GATCGTCGAG AAATATGCAG CCCTGTCGCG TAACGAGACT CTGCTGTCGC TGTTGGCCGA TAAGCCCGCG CTTCAGCAGT TCGCACAACG GACACCTCTG GTGGATATGG TGCGACAGGC GCCGGCTGAA CTGACGGCAG ATCAACTGCT GGGTCTGCTG CGTCCGTTGA CGCCGCGTCT TTACTCTATT GCTTCCTCGC AGGCAGAAGC TGAAAGCGAA GTGCATATCA CCGTTGGCGT GGTGCGCTAC GAATACGAAG GCCGCGCGCG TGCCGGTGGC GCATCCAGCT ATCTGGCTGA CCGACTGAGC GAAGATGATG AAATCCGTGT CTTCATTGAG CACAACGATA ACTTCCGTCT GCCTGCCAAT TCCGATACGC CGGTCATCAT GATCGGGCCG GGCACCGGGA TTGCACCGTT CCGCGCGTTT ATGCAGCAGC GTGATGCCGA AGGGGCAGAA GGGAAAAACT GGCTGTTCTT TGGTAACCCT CACTTTACGG AAGATTTCCT GTATCAGGTT GAATGGCAGC GCTACGTTAA AGATGGGTTG CTGACCAACA TCGATCTGGC GTGGTCACGC GATCAGGCAC ACAAAATCTA TGTGCAGGAC AAGCTACGGG AAAAGGGCGC GGAAGTCTGG CGTTGGATTC AGGACGGTGC GCACCTGTAC GTGTGTGGTG ATGCCAACCG TATGGCGAAA GACGTCGAGC GGGCGCTGCT GGACGTGATA GTTGAGCATG GCGGCATGGA CAGTGAACAA GCCGATGAGT TTTTAAGCGA TCTGCGCCTT GAGCGCCGTT ATCAGCGAGA TGTGTACTAA
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Protein sequence | MTTPVSPTSL LPLSAEQLTR LQAATGDFSS TQLAWLSGYF WGLVQQPGNV QSSTTIAAAA TASAVTVPVQ TITLISASQT GNARRVAEQL RDDLLAAKLS VNLVNAGDYK FKQIGQEKLL LIVTSTQGEG EPPEEAVALH KFLLSKKAPA LKDTAFAVFG LGDTSYEFFS KAGKDFDDRL AELGAERLLD RVDADVDYQA LAEQWRRQLV DILQARVPVQ GEAVAQIAAQ GALDEITSSP YSKSSPLHAT FAVNQKVTGR GSEKDVRHIE IDLGDSGLRY QPGDALGVWF DNDPALVQEL LELLWLKGDE SVSVDGKTLP LSQALKSHFE LTQNTAPIVE KYAALSRNET LLSLLADKPA LQQFAQRTPL VDMVRQAPAE LTADQLLGLL RPLTPRLYSI ASSQAEAESE VHITVGVVRY EYEGRARAGG ASSYLADRLS EDDEIRVFIE HNDNFRLPAN SDTPVIMIGP GTGIAPFRAF MQQRDAEGAE GKNWLFFGNP HFTEDFLYQV EWQRYVKDGL LTNIDLAWSR DQAHKIYVQD KLREKGAEVW RWIQDGAHLY VCGDANRMAK DVERALLDVI VEHGGMDSEQ ADEFLSDLRL ERRYQRDVY
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