Gene PC1_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3345 
SymbolrcsF 
ID8134325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3773329 
End bp3773739 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content52% 
IMG OID644866646 
Productouter membrane lipoprotein 
Protein accessionYP_003018897 
Protein GI253689707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00047922 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGCTG TTCCCTTTAT ATTGTTGGCA ATGTCGCTGA CAGGCTGTTC TTTATTTCAG 
AAGCCACCGG CACCGGCTCC TCAACCCGTT ATTGAAACCA AAACCGCAGA ACCGGCTCCT 
AAACCCAAAC CAGCGGTTCG TCCGACACCT GCGGTATTGT ATAAAAGCGC AGAAGAATTA 
GTCGGTAAGC CTTTCCGTGA TATGGGCGAA GTTTCCGGCT CCTCATGTCA GGTTAGCGCT 
CAGGACTCCC CCCCTAACGC GGCGAATGCA CGTAAAAGAA TGCAAAACCG CGCCACTGCC 
ATGAAAGCCA ATGCGGTTTT ACTGCATGAA TGCCAAACCG TCAGTGGTGT AGCAGGTTGC 
TACAGTCAGG TCGTTTGCCA GGGCACGGCG CTGAAAGTCT CTGCACAATG A
 
Protein sequence
MRAVPFILLA MSLTGCSLFQ KPPAPAPQPV IETKTAEPAP KPKPAVRPTP AVLYKSAEEL 
VGKPFRDMGE VSGSSCQVSA QDSPPNAANA RKRMQNRATA MKANAVLLHE CQTVSGVAGC 
YSQVVCQGTA LKVSAQ