Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3297 |
Symbol | fadE |
ID | 8134270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3714432 |
End bp | 3716879 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644866591 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_003018849 |
Protein GI | 253689659 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGCTG TCAGTATCCT CCTCCTACTG ATTATCATCG GAGCGATGTT TTATCATCGG CTCAGTCTGC TGCTCGGCAG CGCCATTCTG CTGGCCTACT TCGCAGCCAT GTCCGCGATG TTACTGTGGC CCGTCTGGCT GATGATTCCG CTCGTGATCC TGCTGATTCC GATTACGGTT CCTTCCCTGC GTCAAAAATT GGTTTCCGCT TCTGCGCTGC GCATGTTCCA GAAAGTCATG CCGCCGATGT CGAACACGGA AAAAGAGGCG ATCGATGCTG GGACAACCTG GTGGGAAGGC GATCTGTTTC GCGGCGCGCC GGACTGGAAA AAGCTGCATA ACTACCCGCG TCCACAGTTG ACCGCCGAAG AGCAGGCGTT TATCGATGGC CCGGTTGCTG AAGCCTGCCG GATGGCAAAC GACTTTGAAA TCACCCACGA ACGCGCCGAT ATCCCGCCAG AACTGTGGGA ATTTTTAAAA GAGCACCGTT TCTTCGCCAT GATCATCAAG AAGCAATACG GCGGGCTGGA ATTCTCTGCC TATGCACAGG CACAGGTACT GCAAAAACTG GCTGGCGTCT CCAGTATTGT GGCGATCACC GTCGGCGTGC CTAACTCACT CGGCCCCGGC GAACTGCTGC AACACTACGG CACGGAAGCG CAAAAAGATC ACTACCTGCC ACGTCTGGCA CGCGGTCAGG AAGTCCCCTG CTTTGCGCTG ACCAGCCCGG AAGCGGGCTC GGATGCAGGT TCGATTCCCG ATACCGGGAT TGTCTGCTAC GGCAACTGGC ACGGCGAACA GGTTTTGGGT ATGCGCCTGA CCTGGAATAA ACGCTATATC ACACTCGCGC CAGTCGCCAC CGTGCTGGGG CTGGCCTTTA AACTGTACGA TCCCGACCAT CTGTTAGGCA ATGAAGACGA CGTCGGCATT ACCTGTGCGT TGATTCCGAC GGATACCGAC GGCGTTAAAA TCGGCCGTCG TCATTTCCCG CTGAACGTTC CATTCCAGAA CGGGCCGACG CAGGGTGAGA ACATTTTTGT CCCGCTGGAC TACATCATCG GCGGTGCGAA GATGGCGGGT CAGGGCTGGC GTATGCTGAT GGAATGTCTG TCGGTCGGGC GCGGTATTAC GCTGCCGTCC AACTCCACCG GTGGGCTGAA ATCGATTGCT CTCGGCATTG GTGCTTACGC GCACATTCGC CGCCAGTTCA AGATCTCCAT CGGTAAGATG GAAGGTATCG AAGAGCCGCT GGCACGCATT GCGGGTAACG CTTATGTGAT GGACGCCGCC GCAACACTGA TTACCAGCGG TATCATGCAG GGTGAAAAAC CCGCGGTGCT CTCCGCTATC GTCAAATATC ACTGTACCCA CCGCGGTCAG CGCAGCGTGA TGGATGCGAT GGATATCGCT GGTGGTAAAG GTATCTGTCT CGGCCCGACC AACTTTCTGG CACGCAGCTA TCAGGGCGCA CCGATTGCGA TTACCGTGGA AGGGGCAAAT ATCCTGACGC GCAGTATGAT CATCTTCGGG CAAGGTGCCA TCCGCTGTCA CCCTTATGTG CTGGAAGAGA TGGCCGCAGC GCAGGAGAAC GATGTATCAC GCTTTGACCG TGCACTGGTT GGGCACATCG GCCACGTCGG CAGCAACAAA GTGCGCAGCT TCTGGCTTGG ATTGACCAAC AGCCGTCTGA GCCGTGCGCC AGTGAACGAC AAAACGCGTC ATTACTATCA GCAGCTTAAC CGACTCAGTG CGAATCTGGC ACTGCTGGCA GATGTATCGA TGGCGGTACT GGGCGGCAGC CTGAAGCGTC GCGAACGTAT CTCGGCGCGC CTCGGAGATA TTCTCAGCCA GCTTTATCTG GCGTCAGCCA CACTGAAACG CTATGAAGAC GAAGGGCGTC AGAAAGCGGA TTTACCGCTG GTGCACTGGG GCGTGCAGGA CAGCCTGCAT CAGGCCGAGC AGGCGCTGGA CGATCTGCTG CGTAACTTCC CGAATCGTGT CGTAGCAGGA CTGCTGACTT TCATCATCTT CCCACTGGGT CTGCGCTGCC CGGCACCGTC TGACCGCCTC GATCATGAGG TCGCGAAGAT TCTGCAAACG CCGTCGGAGA CGCGTAATCG TCTGGGACGC GGCCAATATC TGGTTGCCAG CGAACACAAC CCGGTCGGGC TGCTGGAAGA GGCTTTACTG GATATCATCG CCGCCGAGCC GATTTACCAA CGTCTGGCGA AAGCCAGCAA CAAGCCGCTG CCGTTCATGC GACTGGATCA GTTGGCAGAA CAAGCGCTGG TGGAAGGTCA GATTACCGCA GAAGAAGCGG CTATTCTGAC CAAAGCCGAA GCCAGCCGCT TACGTTCAAT CAACGTGGAT GACTTTGCGT TCGATGCACT GGCCGCCAAT AAGCCTAAAC CAGTATCGCA GTCAGAAAGA AAAACCGAAG CAGCATAA
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Protein sequence | MVAVSILLLL IIIGAMFYHR LSLLLGSAIL LAYFAAMSAM LLWPVWLMIP LVILLIPITV PSLRQKLVSA SALRMFQKVM PPMSNTEKEA IDAGTTWWEG DLFRGAPDWK KLHNYPRPQL TAEEQAFIDG PVAEACRMAN DFEITHERAD IPPELWEFLK EHRFFAMIIK KQYGGLEFSA YAQAQVLQKL AGVSSIVAIT VGVPNSLGPG ELLQHYGTEA QKDHYLPRLA RGQEVPCFAL TSPEAGSDAG SIPDTGIVCY GNWHGEQVLG MRLTWNKRYI TLAPVATVLG LAFKLYDPDH LLGNEDDVGI TCALIPTDTD GVKIGRRHFP LNVPFQNGPT QGENIFVPLD YIIGGAKMAG QGWRMLMECL SVGRGITLPS NSTGGLKSIA LGIGAYAHIR RQFKISIGKM EGIEEPLARI AGNAYVMDAA ATLITSGIMQ GEKPAVLSAI VKYHCTHRGQ RSVMDAMDIA GGKGICLGPT NFLARSYQGA PIAITVEGAN ILTRSMIIFG QGAIRCHPYV LEEMAAAQEN DVSRFDRALV GHIGHVGSNK VRSFWLGLTN SRLSRAPVND KTRHYYQQLN RLSANLALLA DVSMAVLGGS LKRRERISAR LGDILSQLYL ASATLKRYED EGRQKADLPL VHWGVQDSLH QAEQALDDLL RNFPNRVVAG LLTFIIFPLG LRCPAPSDRL DHEVAKILQT PSETRNRLGR GQYLVASEHN PVGLLEEALL DIIAAEPIYQ RLAKASNKPL PFMRLDQLAE QALVEGQITA EEAAILTKAE ASRLRSINVD DFAFDALAAN KPKPVSQSER KTEAA
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