| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3144 |
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| Symbol | |
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| ID | 8134111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3565268 |
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| End bp | 3566002 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866439 |
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| Product | outer membrane protein assembly complex subunit YfiO |
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| Protein accession | YP_003018703 |
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| Protein GI | 253689513 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCGTA TGAAATATCT GGTGGCTGCC GCCACGTTGA GCCTGGCGCT GGCTGGTTGC
TCCAGCAATT CCAAAGATGC GGTTCCTGAT AGTCCGCCAT CTGAAATCTA TGCTAATGCT
CAACAAAAAC TGCAGGACGG CAACTTTAAA GCAGCCATCA CGCAGTTGGA AGCACTGGAT
AACCGGTATC CGTTTGGTCC CTATTCGCAG CAAGTGCAGT TGGATTTGAT CTACGCCTAT
TACAAATCCG CAGAGCTGCC ATTGGCTCAA GCTTCTATTG ACCGCTTCCT GCGACTCAAC
CCGACCCATC CAAACGTGGA TTATGTCCTG TACATGCGCG GCCTTACCGA CATGGCGCTG
GATGATAGCG CGTTACAAGG CTTCTTCGGC GTCGATCGTT CCGATCGCGA TCCGCAGTAT
GCCCGCACCG CTTTCCGGGA TTTCAGCAAG CTCATTCAGG GATATCCGAA CAGCCAATAC
GCCACCGACG CCAACAAGCG TTTGGTTTAC CTCAAAGAGC GTCTGGCCAA GTATGAACTT
TCTGTCGCGC AATACTACAC GAAACGCAGC GCTTATGTGG CAGTAGTTAA TCGCGTTGAG
CAAATGCTGC GTGATTACCC TGATACTCAG GCAACAAAAA CTGCCCTGCC GTTGATGGAA
AATGCCTATC GTGAACTGCA ACTGGCCGCA CAGGCAGACA AAGTCGCAAA AGTTATTGCC
GCGAACCCGG CATAA
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| Protein sequence | MTRMKYLVAA ATLSLALAGC SSNSKDAVPD SPPSEIYANA QQKLQDGNFK AAITQLEALD
NRYPFGPYSQ QVQLDLIYAY YKSAELPLAQ ASIDRFLRLN PTHPNVDYVL YMRGLTDMAL
DDSALQGFFG VDRSDRDPQY ARTAFRDFSK LIQGYPNSQY ATDANKRLVY LKERLAKYEL
SVAQYYTKRS AYVAVVNRVE QMLRDYPDTQ ATKTALPLME NAYRELQLAA QADKVAKVIA
ANPA
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