| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3135 |
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| Symbol | |
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| ID | 8134097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3549627 |
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| End bp | 3550364 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644866425 |
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| Product | DNA polymerase III subunit epsilon |
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| Protein accession | YP_003018694 |
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| Protein GI | 253689504 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.530396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACTG AAATTACGCG ACAAATCGTC CTGGATACAG AAACCACCGG TATGAATATG
CTGGGGGTTC ACTACGAAGG GCATAAAATT ATCGAGATCG GTGCGGTTGA AGTGATCAAC
CGCCGCCTGA CGGGCCGTCA TTTTCACGTC TATATTAAAC CCGATCGTTT AGTGGATCCC
GAAGCGTATA ACGTGCACGG TATCAGCGAT GAGTTTCTTG CCGACAAACC GACGTATGCG
GATATTGTGG ATGATTTCCT CGATTTTATC CGTGGCGCGG AACTGGTCAT CCATAACGCA
ACGTTTGATA TCGGCTTTAT GGATTATGAA TTTCGGTTGC TGAACCGAGA TCTTCCCAAG
ACAGAGACGT TTTGTAAGAT CACCGATAGC CTGCTTATGG CGCGGAAGAT CTTCCCCGGT
AAGCGTAACA GTTTGGATGC GCTCTGCGAT CGCTATCAGA TAGATAACAG CAAGCGTACG
CTGCACGGCG CATTGCTCGA TGCCGAGATT CTGGCTGAAG TTTATCTGGC GATGACTGGT
GGTCAAACGT CTCTGACTTT CTCCATGGAA GGTGAAACGC AGCAGAAGAA CGAGAATACC
GAAACGATCC AGAGAATTGT CCGCCCTCAA TCGGCGTTAA AGGTGCTTTA CGCCGATGAA
GCTGAGCTAG TCGCGCATGA ACAGCGTCTG GATTTGATTG CTAAAAAAGG CGGTAGTTGC
CTGTGGCGAG CGGAATAA
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| Protein sequence | MSTEITRQIV LDTETTGMNM LGVHYEGHKI IEIGAVEVIN RRLTGRHFHV YIKPDRLVDP
EAYNVHGISD EFLADKPTYA DIVDDFLDFI RGAELVIHNA TFDIGFMDYE FRLLNRDLPK
TETFCKITDS LLMARKIFPG KRNSLDALCD RYQIDNSKRT LHGALLDAEI LAEVYLAMTG
GQTSLTFSME GETQQKNENT ETIQRIVRPQ SALKVLYADE AELVAHEQRL DLIAKKGGSC
LWRAE
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