Gene PC1_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3117 
Symbol 
ID8134078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3532629 
End bp3533126 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content58% 
IMG OID644866406 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_003018676 
Protein GI253689486 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00731833 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGAG TGTATCTGGC GCTGGGCAGC AACCTTGCCC AGCCTTTGCA ACAGGTACGC 
GCTGCACTGG CTGCGCTGGA TGCAATTCCA CAGACCCGCG TCGTTCACTG CTCTTCGTTT
TACCGTAGTC GCCCACTCGG CCCACAGGAT CAGCCGGATT ACCTGAATGC CGTCGTTGAG
CTGGAAACTG AATTAGCCCC CGAATCGCTT CTCGATCGCA CACAGGCAAT CGAGCTGGAA
CAAGGCCGCG AACGTAAGGA ACACCGCTGG GGGCCGCGCA CGTTGGATTT GGACATTCTG
CTGTTCAGCG ATACCGTCAT CCAGACTGAA CGCCTGACCG TGCCGCATTA CGACATGAAG
AATCGCGAAT TCATGCTCTA CCCGCTCGCG GAAATCGCCC CCGAACTGAC ATTCCCCGAC
GGTGAAACAC TCGCCCAACG GCTAACCCAT GTCGATCGCA ACGGTCTGAC ATTGTGGGAC
AACAGCAATC CCGCCTAA
 
Protein sequence
MARVYLALGS NLAQPLQQVR AALAALDAIP QTRVVHCSSF YRSRPLGPQD QPDYLNAVVE 
LETELAPESL LDRTQAIELE QGRERKEHRW GPRTLDLDIL LFSDTVIQTE RLTVPHYDMK
NREFMLYPLA EIAPELTFPD GETLAQRLTH VDRNGLTLWD NSNPA