Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3117 |
Symbol | |
ID | 8134078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3532629 |
End bp | 3533126 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644866406 |
Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
Protein accession | YP_003018676 |
Protein GI | 253689486 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00731833 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGAG TGTATCTGGC GCTGGGCAGC AACCTTGCCC AGCCTTTGCA ACAGGTACGC GCTGCACTGG CTGCGCTGGA TGCAATTCCA CAGACCCGCG TCGTTCACTG CTCTTCGTTT TACCGTAGTC GCCCACTCGG CCCACAGGAT CAGCCGGATT ACCTGAATGC CGTCGTTGAG CTGGAAACTG AATTAGCCCC CGAATCGCTT CTCGATCGCA CACAGGCAAT CGAGCTGGAA CAAGGCCGCG AACGTAAGGA ACACCGCTGG GGGCCGCGCA CGTTGGATTT GGACATTCTG CTGTTCAGCG ATACCGTCAT CCAGACTGAA CGCCTGACCG TGCCGCATTA CGACATGAAG AATCGCGAAT TCATGCTCTA CCCGCTCGCG GAAATCGCCC CCGAACTGAC ATTCCCCGAC GGTGAAACAC TCGCCCAACG GCTAACCCAT GTCGATCGCA ACGGTCTGAC ATTGTGGGAC AACAGCAATC CCGCCTAA
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Protein sequence | MARVYLALGS NLAQPLQQVR AALAALDAIP QTRVVHCSSF YRSRPLGPQD QPDYLNAVVE LETELAPESL LDRTQAIELE QGRERKEHRW GPRTLDLDIL LFSDTVIQTE RLTVPHYDMK NREFMLYPLA EIAPELTFPD GETLAQRLTH VDRNGLTLWD NSNPA
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