Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3115 |
Symbol | |
ID | 8134076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3530019 |
End bp | 3531077 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644866404 |
Product | glutamyl-Q tRNA(Asp) synthetase |
Protein accession | YP_003018674 |
Protein GI | 253689484 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000632224 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGGAA CCGCTGGTTT TACCGAAAAA AACCGTTTTG CTGAAATTAA TAGTTTTACT GAAGCTAATA GTTTTACTGA AATTAATAGT TTTACTGAAA TTAATCGTCT TGCTGAAACC AGCCCTTCTC CTGAATCGCC CCCTTTTACT GAAACCGACC ACTATGTCGG ACGTTTTGCG CCTTCTCCCT CTGGCGATCT GCATTTTGGC TCACTCATCG CCGCACTGGG TAGTTATCTG CAAGCGCGTT CCCAACAAGG GCGTTGGCTG GTACGCATTG AAGACATCGA TCCGCCACGG GAAATTCCCG GTGCCGCCTC CCGCATACTT GCCCAGTTAG AACACTACGG CCTGTACTGG GACGGCGATG TGATTTACCA GTCACAACGC CATGCACGTT ACCGTGAGAT TCTTCAGCAG TTACAACAGC AGGGAATGAG TTATTACTGC ACCTGTACGC GTAGCCGTAT TCAGCAGCTA GGCGGGCACT ATGACGGCTA TTGTCGGACG CGTAATCTTC CCGCCGACAA CGCCGCACTA CGCCTGCGCC AAACGACGCC AGTATTCCAT TTTCACGATA GATTGCGTGG TGAGTTGTAT GCCGACACGG CACTCGCGCA GGAAGATTTT ATTATTCACC GCCGCGACGG GCTGTTTGCC TATAATCTGG CCGTCGTGAT CGACGATAAC GATCAGGGTA TTACGGAGAT CGTACGCGGC GCCGATCTTA TCGAGCCGAC AGTCCGGCAA ATTTCGCTCT ATCAGCAGTT AGGCTATGCG ATCCCGACCT ATGTTCATCT TCCGCTGGTT CTGAATACAG ACGGAAATAA GCTTTCCAAA CAAAATCATG CACCGGCGTT ACCGAATAGC GATCCGCGTC CCGTGCTGCT TGCCGCACTG CAATTTTTGC ATCAACCGCT GCCGGAACAC GCTCAGGACA TGACGCTTTC TGCACTGCTG GCATGGTCTG TCGCGCACTG GTCCCTTGAT GTCATCCCGC TACAGGCGGC AATAAACGCG TCCGCGATCA CATCAGCATT CTCAAAGGGG CATTGGTGA
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Protein sequence | MSGTAGFTEK NRFAEINSFT EANSFTEINS FTEINRLAET SPSPESPPFT ETDHYVGRFA PSPSGDLHFG SLIAALGSYL QARSQQGRWL VRIEDIDPPR EIPGAASRIL AQLEHYGLYW DGDVIYQSQR HARYREILQQ LQQQGMSYYC TCTRSRIQQL GGHYDGYCRT RNLPADNAAL RLRQTTPVFH FHDRLRGELY ADTALAQEDF IIHRRDGLFA YNLAVVIDDN DQGITEIVRG ADLIEPTVRQ ISLYQQLGYA IPTYVHLPLV LNTDGNKLSK QNHAPALPNS DPRPVLLAAL QFLHQPLPEH AQDMTLSALL AWSVAHWSLD VIPLQAAINA SAITSAFSKG HW
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