Gene PC1_3114 details

Gene Information

• Locus tag: PC1_3114
• Symbol: dksA
• ID: 8134075
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 3529436
• End bp: 3529891
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644866403
• Product: RNA polymerase-binding transcription factor
• Protein accession: YP_003018673
• Protein GI: 253689483
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1734] DnaK suppressor protein
• TIGRFAM ID: [TIGR02420] RNA polymerase-binding protein DksA

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0231493
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAAG GGCAAAACCG TAAGACATCT TCTCTGAGCA TTCTCGCAAT TGCCGGAGTA 
GAGCCGTACC AGGAGAAGCC GGGCGAAGAG TATATGAACG ACGCTCAGCT GGCTCATTTC 
AAGCGTATTC TTGAAGCATG GCGCAACCAA CTCATGGATG AAGTGGATCG AACTGTATCG 
CACATGCGCG ATGAAGCTGC TAATTTCCCC GATCCCGTGG ATCGTGCTGC GCAGGAAGAA 
GAGTTCAGTC TCGAACTGCG TAACCGTGAC CGTGAGCGCA AACTGATCAA GAAAATCGCC 
AAAACACTGG TGAAAATCGA AGAAGAGGAT TTCGGATTCT GCGAATCCTG TGGCGTCGAG 
ATTGGCATCC GCCGTCTGGA AGCACGTCCG ACCGCCGATC TGTGTATCGA CTGCAAAACA 
TTGGCAGAGA TACGCGAAAA GCAAATGGCA GGATAA 

 

Protein sequence

MQEGQNRKTS SLSILAIAGV EPYQEKPGEE YMNDAQLAHF KRILEAWRNQ LMDEVDRTVS 
HMRDEAANFP DPVDRAAQEE EFSLELRNRD RERKLIKKIA KTLVKIEEED FGFCESCGVE 
IGIRRLEARP TADLCIDCKT LAEIREKQMA G