| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3072 |
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| Symbol | |
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| ID | 8134027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3479146 |
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| End bp | 3480111 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866355 |
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| Product | signal peptidase I |
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| Protein accession | YP_003018631 |
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| Protein GI | 253689441 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0190476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAATA TGTTTGCCGT AATTCTGGCA TTGGTGACGC TGGTCACGGG GATTGTCTGG
TGTTTAGAGC GCTTTGTCTG GGCGCCTGCT CGCCGGAAAA AGTTTGCTGC CATGAGCGGT
GCCGATCTGG CTGATGGCGC GGTTTCATCG AAAGTCATTC CACAACCTGG CTGGATTGAA
ACTATCGCGT CCGTATTCCC GGTTGTGGCT TTGGTATTGG TTGTGCGCTC CTTCATTTAT
GAGCCGTTTC AAATTCCATC AGGTTCGATG ATGCCGACGC TGTTGATCGG TGATTTTATT
CTGGTGGAAA AATTTGCCTA TGGCATTAAA GAACCCTTCA CGCAGAAAAC GCTGATCGAA
ACGGGGCACC CGAAACGTGG CGACGTGGTG GTGTTTAAAT ATCCGTCCGA CCCTAAAGTG
GACTTTATCA AGCGTGTAGT GGGCGTGCCG GGCGATCGTG TCAGCTATAA CCCGATGACC
AAGCAGGTAA CGATCCGTCC ATCCTGTCAG GGGCAGCAGG CGTGTGATAC TGCACTGGCA
GTTACATACA GTAATGTGCA GCCTAGCGAT TTTGTTCAGA CCTTCAATCA GCCGGGTATG
GAATCGCGTG GCGGTTTCTA TCAGGTGCCT GTCAATGACA ACAGCGTGGA GGGAGTCCGC
ATGGGCGCGC GCAAAGAGTC ATTGGGCAAT GTAACGCATA ATATTCTCTT GGTGCCGGGT
CAGCAGGATC AGCTCGGTGG TTATTACCAG CAGTCGCAGC AGCAGCTCGC AACATGGGTT
GTCCCAGCAG GGCACTACTT CATGATGGGT GATAACCGTG ACAACAGTCT GGATAGCCGC
TATTGGGGCT TTGTGCCGGA GAGAAATCTG GTCGGTAAAG CCACCGCTAT CTGGATGAGC
TTTGAGAAGC AGGAAGGTGA ATGGCCTACG GGTGTACGTT TGAGTCGCAT CGGTGGTATT
CATTAA
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| Protein sequence | MANMFAVILA LVTLVTGIVW CLERFVWAPA RRKKFAAMSG ADLADGAVSS KVIPQPGWIE
TIASVFPVVA LVLVVRSFIY EPFQIPSGSM MPTLLIGDFI LVEKFAYGIK EPFTQKTLIE
TGHPKRGDVV VFKYPSDPKV DFIKRVVGVP GDRVSYNPMT KQVTIRPSCQ GQQACDTALA
VTYSNVQPSD FVQTFNQPGM ESRGGFYQVP VNDNSVEGVR MGARKESLGN VTHNILLVPG
QQDQLGGYYQ QSQQQLATWV VPAGHYFMMG DNRDNSLDSR YWGFVPERNL VGKATAIWMS
FEKQEGEWPT GVRLSRIGGI H
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