Gene PC1_3054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3054 
Symbol 
ID8134009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3446241 
End bp3446738 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content56% 
IMG OID644866337 
ProducttRNA-specific adenosine deaminase 
Protein accessionYP_003018613 
Protein GI253689423 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAATG ATGAATACTG GATGCGCTAT GCATTGACGC TGGCTCAGCG TGCACAGGAT 
GAAGGCGAAG TGCCAGTTGG TGCGGTGTTG GTGTTGGATA ATGAAGCCAT TGGCGAAGGG 
TGGAACCGAC CCATCGGACA TCACGATCCT ACCGCGCACG CTGAGATTAT GGCGCTGCGG 
CAGGGAGGGC AGGTGTTGCA GAATTATCGC CTGCTAGATA CCACGCTGTA TGTCACGTTG 
GAGCCCTGCA TCATGTGCGC AGGCGCGATG ATACACAGCC GTATTGGCCG TTTGGTTTAC 
GGTGCATCAG ATGAGAAAAC CGGGGCAGCG GGGTCGCTGG TGGACATTCT GCGTCACCCT 
GGCATGAACC ATCAGATCGT GATTGAATCC GGCATTCTGG CTGAGGAATG TTCTGCAACG 
CTCAGCGCAT TCTTTCGTCT GCGCCGTGAG CAGCATAAAG CCCGTCGGGC GGCAGAGAAA 
AACGCCGCGC AGGAATAA
 
Protein sequence
MSNDEYWMRY ALTLAQRAQD EGEVPVGAVL VLDNEAIGEG WNRPIGHHDP TAHAEIMALR 
QGGQVLQNYR LLDTTLYVTL EPCIMCAGAM IHSRIGRLVY GASDEKTGAA GSLVDILRHP 
GMNHQIVIES GILAEECSAT LSAFFRLRRE QHKARRAAEK NAAQE