Gene PC1_3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3032 
Symbol 
ID8133987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3416983 
End bp3417477 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content55% 
IMG OID644866315 
ProductDNA-binding transcriptional regulator IscR 
Protein accessionYP_003018591 
Protein GI253689401 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.178839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTGA CATCCAAAGG CCGTTACGCC GTTACCGCCA TGCTCGATGT GGCTCTGCAT 
TCCCAGGAAG GGCCAGTTCC ATTGGCGGAT ATTTCTGAAC GCCAAGGTAT TTCACTGTCT 
TATCTGGAGC AGCTGTTTTC ACGCTTGCGT AAGAATGGAC TGGTTGCCAG CGTTCGTGGC 
CCGGGCGGCG GTTACCTGCT GGGTAAAAGC GCGAATGAAA TCGCCGTTGG TATGGTTATT 
TCTGCCGTCG ATGAATCCGT GGATGCAACA CGCTGCCAGG GTCGTGAAGG CTGTCAGGGT 
GGCGATCGCT GCCTGACACA CACGCTGTGG CGCGATCTGA GTGACCGTAT TACCGACTTC 
CTGAATAACA TCACGCTGGA CGAGCTGGTG AATAATAAGG AAGTGCTGGA TGTTGCGGAT 
CGTCAGGATG CGGACATTCG CCGCACCGCC AATGGACGTA TTCAGGAAAC GATCAACGTT 
AACCTGCGCG CCTGA
 
Protein sequence
MRLTSKGRYA VTAMLDVALH SQEGPVPLAD ISERQGISLS YLEQLFSRLR KNGLVASVRG 
PGGGYLLGKS ANEIAVGMVI SAVDESVDAT RCQGREGCQG GDRCLTHTLW RDLSDRITDF 
LNNITLDELV NNKEVLDVAD RQDADIRRTA NGRIQETINV NLRA