Gene PC1_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2993 
Symbol 
ID8133948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3379085 
End bp3379714 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content47% 
IMG OID644866276 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_003018552 
Protein GI253689362 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACATTT TACATATAGA CTCCAGTATT CTTGAGAACG GTTCCGTTTC CCGACAGATT 
TCTGCTGATG TTGTGGTGCA ATTAGTCAAA CAGCATCCGA ATGCCGTTGT CTCTTATCGG 
GATGTGGTTA AAGATGAAAT TCGCCATTTA ACCGCGCCGA TTGCCGCCGG TTTCCGCCAA 
CAAATAGCGT CCTCTTCAGC GGATGACGCC ACGCTGCGTG AACACCAATT ATCTGAAACG 
CTGGTCGCGG AGTTTCTGGC GAATGACGTG ATTGTTATTG GTGCGCCGAT GTATAACTTT 
TCCGTCTCGA GCCAGCTGAA ATCATGGTTA GACCGGCTCG CGCAGGCTGG CAAAACGTTT 
AAATATACGG AAAAAGGTCC GGTGGGTTTG TCTGGGGGAC GAACGGTTAT TGTTGTTTCT 
TCTCGCGGTG GTTTTTATAC CGCTCCGCCT TTTTTAGATA TGGATTTTCA GGAGCGGTAT 
CTTCAGGGCT TTTTCCGGTT TCTTGGTATT ACGGATATTC ATTTTGTCCG TGCGGAAGGC 
GCTTCAAAAG GGGATGAAGT CAAGAATCGT GAAATTCACA ATGCGAAAGA CTCTATCCAT 
TCTGTTATTA CATCCATAGC CGTTCAATAA
 
Protein sequence
MNILHIDSSI LENGSVSRQI SADVVVQLVK QHPNAVVSYR DVVKDEIRHL TAPIAAGFRQ 
QIASSSADDA TLREHQLSET LVAEFLANDV IVIGAPMYNF SVSSQLKSWL DRLAQAGKTF 
KYTEKGPVGL SGGRTVIVVS SRGGFYTAPP FLDMDFQERY LQGFFRFLGI TDIHFVRAEG 
ASKGDEVKNR EIHNAKDSIH SVITSIAVQ