Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2979 |
Symbol | |
ID | 8133934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3365449 |
End bp | 3366252 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644866262 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_003018538 |
Protein GI | 253689348 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTA TCAATGCGTT GACGATTGCG GGCACCGATC CGAGCGGTGG CGCGGGGATT CAGGCGGATT TAAAAGCCTT TTCCGCATTG GGCGCTTACG GCACGTCGGT TATTACCGCG CTGGTGGCGC AAAATACGCG CGGCGTGCAG TCCGTCTACC GAATTGAGCC GGATTTTGTC GCGGCGCAGC TGGATTCCGT GTTGAGCGAT GTCCGTATCG ACAGCGCCAA GATTGGGATG CTGGCACAGA CCGATATTGT CGAAACCGTT GCCGAACGCC TGCGTCACTA CGCGGTGCCT TTCATTGTGC TGGACACCGT AATGCTGGCG AAAAGCGGCG ACCCGCTGCT CGCACCCGAG GCGGTGGAGT CAATCCGCCG TGAGCTGCTG CCGCTGGTTT CCCTGATAAC ACCCAACTTG CCCGAGGCCG CGGCGCTGTT GAAGACATCA CCTGCCGCCA ACGAGCGGGA AATGCGCGAG CAAGGGGAAG CGCTGCTGGC GATGGGCTGT CAGGCCGTGC TGATGAAAGG CGGCCATCTT AGTGAAGCGG AAAGCCCGGA TTGGCTATTC AGTCGACAGG CTGAAGCGCA GCGCTTTAGT TCCCCGCGTG TGAATACCCG TCATACGCAC GGCACTGGCT GCACGTTATC TGCTGCACTG GCGGCGCTGC GACCGCGCCA CGATAGTTGG GGAGAGACGG TCAAGGCCGC GAAGGACTAC TTACAGCAGG CGTTACAGCA GGCCAACACG CTGGAAGTCG GACATGGCAT CGGCCCCGTT CATCACTTCC ACCGCTGGTG GTAA
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Protein sequence | MKRINALTIA GTDPSGGAGI QADLKAFSAL GAYGTSVITA LVAQNTRGVQ SVYRIEPDFV AAQLDSVLSD VRIDSAKIGM LAQTDIVETV AERLRHYAVP FIVLDTVMLA KSGDPLLAPE AVESIRRELL PLVSLITPNL PEAAALLKTS PAANEREMRE QGEALLAMGC QAVLMKGGHL SEAESPDWLF SRQAEAQRFS SPRVNTRHTH GTGCTLSAAL AALRPRHDSW GETVKAAKDY LQQALQQANT LEVGHGIGPV HHFHRWW
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