Gene PC1_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2978 
Symbol 
ID8133933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3364889 
End bp3365296 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content49% 
IMG OID644866261 
Productphosphate-starvation-inducible protein PsiE 
Protein accessionYP_003018537 
Protein GI253689347 
COG category[S] Function unknown 
COG ID[COG3223] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGTT CTGCTCGCAG TGCGATGGCT GCCAAAGCAC TTCAGACGAT ACTCAATATC 
GGCCTGCTGG TGCTGGCGAC TATTCTGGTG ATTTTTTTAG TCAAGGAAAC GTTCCATCTG
GCGAAGGTGC TGTTGATCTC CAACGAGAAA GATTCCTCCT ATCAGCTGAT AGAAGGGATT
GTGATCTATT TCCTGTATTT TGAGTTTATT GCGCTGATCG TGAAGTATTT CCAGTCCGGC
TATCACTTCC CGCTGCGCTA TTTTATCTAC ATCGGCATTA CGGCCATCAT TCGCCTGATT
ATTGTCGATC ACAAAAGCCC GTCGGATACG CTGATGTATT CCGCGGCGAT CCTGCTGCTG
GTCGTCACGC TGTATCTGGC AAACAGTAAT CGCCTGAAAC GGGAATAG
 
Protein sequence
MAGSARSAMA AKALQTILNI GLLVLATILV IFLVKETFHL AKVLLISNEK DSSYQLIEGI 
VIYFLYFEFI ALIVKYFQSG YHFPLRYFIY IGITAIIRLI IVDHKSPSDT LMYSAAILLL
VVTLYLANSN RLKRE