| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2970 |
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| Symbol | |
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| ID | 8133925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3355980 |
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| End bp | 3357380 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866253 |
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| Product | multidrug efflux system protein MdtE |
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| Protein accession | YP_003018529 |
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| Protein GI | 253689339 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATT CCGCCTCTGT CCGCTGGCAG CTCTGGATTG TTGCCTTTGG CTTTTTTATG
CAGACGCTGG ATACCACCAT CGTGAATACC GCGCTGCCGT CAATGGCCGC GAGTCTGAAT
GAAAGCCCGC TGCATATGCA TTCGGTGATC GTTTCCTATG TGCTGACCGT GGCGGTGATG
CTGCCCGCCA GCGGCTGGCT GGCGGATCGT ATCGGCGTGA AGAACATATT TTTCGCCGCG
ATTCTTCTGT TTACGCTCGG ATCGCTGCTG TGCGCTCGTT CGGAAACGCT GAATGAGCTG
CTGGCCTCGC GCGTTATTCA GGGGATCGGC GGAGCGATGA TGGTGCCGGT AGGGCGACTG
ACGGTGATGA AAATCGTCCC GCGCGATCAG TATATGGCGG CGATGACCTT CGTGACGCTG
CCCGGCCAAA TCGGTCCGTT AATGGGGCCC GCACTCGGCG GCTTTCTGGT GGAGTACGCC
AGTTGGCACT GGATCTTCCT CATCAACCTG CCCGTTGGCA TTATCGGCGC GCTGGCCACC
TGGTTCCTGA TGCCCAATTA CACCATGCGG ACGCAACGCT TTGACATCAG CGGCTTCCTC
TGGCTTGCTG TCGGTATGGC GACGCTGACG CTGGCGCTGG ACGGTAACCG CAGCCTCGGC
ATTCCACCGA TTGCCATTTT TGCATTAATC ACCGTTGGGC TGATCGCACT GCTGAGCTAT
TGGCTGCACG CGCGTCGTAA CGAACGAGCC CTGTTTAATC TGCGTCTGTT CGACACCCAT
ACCTTCTCTA TCGGCCTGAC AGGCGGGCTA TTGGCGCGCA TCGGCAGCGG TATGTTACCG
TTTATGACGC CGCTGTTTTT ACAGCTGGGA ATGGGCTTTT CGCCGTTCCA TGCCGGGCTG
ATGATGGTGC CAATGGTGCT AGGCAACATG GGAATGAAGC GAATCGTCGT GCAGATCGTC
AATCGCTTAG GCTACCGCCG CGTGCTGATT GTCTCGACAC TGCTGCTGGC ACTGGTCACC
GCGCTGTTTG CGCTGGTCGC ACTTATGCAA TGGATCTGGA TGATCCCGAT CGTGCTGTTC
TTCCTCGGCA TGGTGAACGC CATTCGTTTC TCCACCATGA ACACGCTAAC GCTGAAGGAT
CTACCGGATA CACTCGCCAG CGGCGGCAAT AGCCTGATGT CGATGACCAT GCAGTTGTCC
ACCAGCCTCG GCGTCAGCAT CGCAGGTATT CTGCTGGGCA TGTTTTCTCA ACCGCACATG
GCGGCAGGAA GTGGAGAAAC CCACATGGTG TTTATTTACA CCTACCTCAG CATGATCGTC
ATCATCGCCC TGCCCGCATT GATTTTTAAC CGTGTCCCGG CAGACACCAT CAAGCAGTCA
ACGCTGCCGC GTAAATCGTG A
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| Protein sequence | MMNSASVRWQ LWIVAFGFFM QTLDTTIVNT ALPSMAASLN ESPLHMHSVI VSYVLTVAVM
LPASGWLADR IGVKNIFFAA ILLFTLGSLL CARSETLNEL LASRVIQGIG GAMMVPVGRL
TVMKIVPRDQ YMAAMTFVTL PGQIGPLMGP ALGGFLVEYA SWHWIFLINL PVGIIGALAT
WFLMPNYTMR TQRFDISGFL WLAVGMATLT LALDGNRSLG IPPIAIFALI TVGLIALLSY
WLHARRNERA LFNLRLFDTH TFSIGLTGGL LARIGSGMLP FMTPLFLQLG MGFSPFHAGL
MMVPMVLGNM GMKRIVVQIV NRLGYRRVLI VSTLLLALVT ALFALVALMQ WIWMIPIVLF
FLGMVNAIRF STMNTLTLKD LPDTLASGGN SLMSMTMQLS TSLGVSIAGI LLGMFSQPHM
AAGSGETHMV FIYTYLSMIV IIALPALIFN RVPADTIKQS TLPRKS
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