Gene PC1_2952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2952 
Symbol 
ID8133907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3329812 
End bp3330975 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content57% 
IMG OID644866235 
Productgalactokinase 
Protein accessionYP_003018511 
Protein GI253689321 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID[TIGR00131] galactokinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTA TTGATTCTCT ACGTCAGTTA ACCGAGTCTG TTTTTGTCCG ATTATTTGGC 
TATGCGCCGC ATGCCGCTAT TCAGGCACCC GGTCGGGTTA ACCTGATTGG CGAGCACACC
GACTATAACG ATGGGTTTGT CTTGCCGTGT GCTATTGATT ACCAGACTGT GGTCAGTGCT
GCGGTGCGTC AGGACGGCAT CGTGCGGGTG GTGGCGGTGG ATTTTGACAA CCAGCAGGAT
GAGTTCGATC TTGCTAAAGC AATCGAGCCT CATCCGGAAT ACACCTGGGC CAACTATATC
CGTGGCACGG TGAAATTTTT GCTGGCGCGC GGCCTACCGC TCAGCGGCAT GGACATGGTC
GTGTCCGGCA ACGTGCCTTC TGGTGCAGGA CTAAGCTCAT CGGCCTCGCT GGAAGTGGCG
ATCGGGCAGA CGTTCAAAGA GCTGAATAAT CTGGACATCA GCCAGCTGGA TGTGGCGCTA
AACGGACAGC AGGCAGAAAA CGATTTTGTC GGCTGTAGCT GCGGCATTAT GGATCAGTTT
ATTTCCGCTC AGGGACGTGT CGGTCAGGCG ATGTTGATCG ACTGCCGCAC TCTGGAAGGG
CGTGCCGTGC GTATGCTCGA CGGCATTGAC GTTCTGATCG TGAATTCCAA TGTGCGTCGT
GGGCTGGTGG ACAGCGAATA CAATACGCGA CGCCAGCAGT GTGAAGCGGC AGCGCGTCAC
TTTAACGTCA AGGCGCTGCG TGATGTTTCC CTGTCGCAGT TTGAAGCGGG AATCGCGGGT
CTGGATCCGG TGGCGGTTCG CCGCGCGCGC CACGTGATTA CCGAGAACCG CCGCACGTTG
GAAGCGGCCG ATGCACTGGC GCGTCAGGAT GCCCACCGTT TGTTTACGCT GATGGCGGAA
TCGCATGTCT CTATGCGGGA TGATTTTGAA ATTACCGTGC CGCCGATCGA TACGTTGGTC
GCGTTAATTC AGGATTATGT CGGCGAGCGG GGCGGTGTCC GTATGACCGG CGGCGGTTTC
GGTGGCTGTA TTGTCGCCCT GATCCCTTCG GCGCTGACTG ACGAGGTCAA ACAGGTGATT
GAACGTGAAT ATCCGGCGCG TACCGGGCTT CAGCCGTCTA TCTATCTGTG TCAGGCATCC
GGCGGTGCGG GTCGCTTGAA CTAA
 
Protein sequence
MSRIDSLRQL TESVFVRLFG YAPHAAIQAP GRVNLIGEHT DYNDGFVLPC AIDYQTVVSA 
AVRQDGIVRV VAVDFDNQQD EFDLAKAIEP HPEYTWANYI RGTVKFLLAR GLPLSGMDMV
VSGNVPSGAG LSSSASLEVA IGQTFKELNN LDISQLDVAL NGQQAENDFV GCSCGIMDQF
ISAQGRVGQA MLIDCRTLEG RAVRMLDGID VLIVNSNVRR GLVDSEYNTR RQQCEAAARH
FNVKALRDVS LSQFEAGIAG LDPVAVRRAR HVITENRRTL EAADALARQD AHRLFTLMAE
SHVSMRDDFE ITVPPIDTLV ALIQDYVGER GGVRMTGGGF GGCIVALIPS ALTDEVKQVI
EREYPARTGL QPSIYLCQAS GGAGRLN