| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2940 |
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| Symbol | |
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| ID | 8133895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3315391 |
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| End bp | 3316758 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866223 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_003018499 |
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| Protein GI | 253689309 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.544189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTCAGCG TATTTGATAT CTTCAAAATC GGTATCGGCC CGTCCAGTTC TCATACCGTC
GGCCCAATGA AAGCGGGCAA GATGTTCACC GACGATCTGG TGAACCGCGC GCTTATCTCA
TCCGTGACAT CCATCGTCGT TGATATTTAC GGCTCGCTCT CCCTGACGGG AAAAGGTCAC
CACACCGATA TCGCCATCAT TATGGGATTA GCCGGTAACC TGCCAGATAG CGTTAATATC
GATAGCATTC CGGCCTTTAT TCAGCAGGTG AAAGAGACTC AGCGGTTACC GATACTCAAC
GGTCAATATG AGGTCAGCTT CCCGCTGGAA ACCTCCCTGC GTTTCCAACC GGAAAACCTG
CCGCTGCATG AAAACGGCAT GACCATTCGC GCCTACAGCG GACAAGAGCG GGTCTATAGC
AAAACGTATT ACTCCATCGG GGGCGGATTC GTCGTCGATC AGGAAAACTT CGGCAAACCC
AATTTGGCAG AGGAAAGCGC GCCCTACCCG TTCTTTTCTG CCCAGAAACT GCTGCAACAT
TGTCACGATC ACTGCCTGTC GTTATCCGCT ATCGTCCTGA AAAACGAGAT TGCGATGCAT
GGCCGGGAAG CACTTGAGCA CTATTTTGCC GACGTGTGGA AAACCATGCA GGATTGTATG
CATCGCGGCA TGAATACGGA AGGTGTGTTG CCCGGCCCGT TACGCGTTCC CCGCCGGGCA
TCGGCGCTGC ATCGCCTGCT GTTCATCAAC GATCGTTTTT CTAACGATCC GATGGATGCG
ATGGACTGGG TTAACATGTT CGCCATGGCC GTGTCGGAAG AAAATGCGGC AGGCGGACGC
GTGGTCACTG CACCAACTAA CGGCGCGTGC GGTATTATTC CTGCCGTGCT GGCCTATTAC
GATCGCTACG TTCAACCGGT CACGCCGGAA TCTTACCTGC GCTATTTTCT GGCAGCTGGC
GCTATCGGTA TGCTCTACAA AATGAATGCG TCTATTTCCG GGGCTGAAGT GGGCTGTCAG
GGCGAAGTTG GCGTGGCCTG CTCAATGGCC GCGGCCGGTC TGGCAGAACT CCTCGGCGCC
AACCCGGAGC AGGTGTGCAT CGCGGCGGAA ATCGGCATGG AGCACAATCT GGGGCTGACG
TGCGATCCGG TCGCGGGTCA GGTTCAAGTG CCATGCATCG AACGTAACGC CATTGCCTCC
GTGAAAGCGA TCAACGCCGC AAGAATGGCC ATGCGCCGCG CCAGTGAACC ACGCGTATCG
CTCGATAAAG TAATTGAAAC CATGTATGAA ACAGGCAAAG ACATGAACGC CAAGTACCGT
GAAACCTCTC GCGGGGGATT GGCGATTAAA GTCGTGCTGT GCGAATGA
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| Protein sequence | MVSVFDIFKI GIGPSSSHTV GPMKAGKMFT DDLVNRALIS SVTSIVVDIY GSLSLTGKGH
HTDIAIIMGL AGNLPDSVNI DSIPAFIQQV KETQRLPILN GQYEVSFPLE TSLRFQPENL
PLHENGMTIR AYSGQERVYS KTYYSIGGGF VVDQENFGKP NLAEESAPYP FFSAQKLLQH
CHDHCLSLSA IVLKNEIAMH GREALEHYFA DVWKTMQDCM HRGMNTEGVL PGPLRVPRRA
SALHRLLFIN DRFSNDPMDA MDWVNMFAMA VSEENAAGGR VVTAPTNGAC GIIPAVLAYY
DRYVQPVTPE SYLRYFLAAG AIGMLYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGA
NPEQVCIAAE IGMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAINAARMA MRRASEPRVS
LDKVIETMYE TGKDMNAKYR ETSRGGLAIK VVLCE
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