| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2935 |
|---|
| Symbol | |
|---|
| ID | 8133890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 3310404 |
|---|
| End bp | 3310898 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644866218 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase B (rotamase B) |
|---|
| Protein accession | YP_003018494 |
|---|
| Protein GI | 253689304 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0366862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACGC TTCATACCAA CCACGGCGAT ATCGTTATTA ATACGTTTGC AGACAAGGCG
CCGGTTACCG TAGAAAACTT CCTGAACTAC TGCCGCAGCG GTTTTTATGA CAACACGATT
TTCCACCGTG TGATTAATGG TTTCATGATT CAGGGCGGCG GCTTCGCTCC CGGTATGGAT
CAGAAAGAAA CCAACGCGAC AATCAAAAAT GAAGCCAACA ACGGCCTGAA AAACACGCGT
GGCACGCTGG CAATGGCGCG TACCAACGAT CCGCACTCTG CAACGGCTCA GTTCTTTATC
AACGTTGTCG ATAACGACTT CCTGAACTTC CGTTCAGAGC GTGCAGATGG CTGGGGCTAC
TGCGTTTTCG CTGAAGTCGC CGAAGGTATG GACGTCGTTG ATAAAATCAA AGGCGTAGCT
ACTGGCCGCA GCGGCATGCA TCAGGACGTA CCGAAAGAAG ACGTGGTAAT TACCCACGTA
ACGGTCAGCG AATAA
|
|---|
| Protein sequence | MITLHTNHGD IVINTFADKA PVTVENFLNY CRSGFYDNTI FHRVINGFMI QGGGFAPGMD
QKETNATIKN EANNGLKNTR GTLAMARTND PHSATAQFFI NVVDNDFLNF RSERADGWGY
CVFAEVAEGM DVVDKIKGVA TGRSGMHQDV PKEDVVITHV TVSE
|
|---|
| |