Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2929 |
Symbol | |
ID | 8133884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3303278 |
End bp | 3304444 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644866212 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_003018488 |
Protein GI | 253689298 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATAG CGATTAGCGG AACAGGATAT GTCGGTTTAT CGAATGGATT ATTATTGGCA CAACAGCATC AGGTTGTGGC GTTAGATATT GTGGCTGAAA AAGTGGCGAT GTTGAATCAA CGCAAATCGC CGATTAATGA CGCCGAGATT GAGCGTTTTT TACAACACGA AACGCTGAAT TTTTCCGCTA CGCTGGATAA GCATGAAGCG TATGCCGATG CGCAGTTCGT GATTATCGCT ACGCCGACAG ATTACGATCC ACACACTAAC TATTTCAACA CGTCGTCGGT AGAGGCGGTC ATTCGCGATG TGCTGGCGAT TAACCCACAG GCCATTATGG TGATTAAATC GACGGTGCCT GTTGGTTTCA CCGAGAAAAT CAGCCAGCAG TTGGATACCG ATAACATCAT TTTTTCGCCC GAGTTTTTGC GCGAAGGAAA GGCGCTGTAC GACAACCTTT ACCCATCGCG GATTGTCGTG GGTGAGCGGT CGGAAAGAGC CCGTTTTTTC GCTAACCTAT TGATGGAATG TGCATTAAAA AAAGATATTC GCGTACTGTT TACCGACCCG ACAGAGGCCG AGGCGATAAA ACTGTTTGCG AATACCTTCC TGGCGATGCG TGTCGCCTAC TTTAATGAAT TGGACAGCTA TGCTGAATCG CTGGGGTTGA ATACCCGGCA GATTATTGAA GGTGTGTGCC TCGATCCGCG TATTGGCAAC TACTACAACA ATCCTTCTTT CGGCTACGGC GGCTACTGTT TGCCGAAGGA TACCCGGCAG CTTTTGGCTA ACTATCGTAC TGTTCCGAAT AACCTTATCA AGGCTATCGT GGACGCTAAC CATACGCGGA AAGACTTCAT TGCCGATACG ATTATCCGGC GCCATCCGAA AACCGTCGGC GTTCATCGCC TCATCATGAA AGCGGGGTCG GATAATTTTC GCTTTTCTTC CATTCAGGGC ATTATGAAAA GGATAAAAGC GAAAGGAATC AATGTCGTGG TTTATGAACC TGGGATTGAT GATGATGATT TCCTGGATTT CCCCGTCATT CACCAACTCG ATAGTTTTAA ACAACAGTGT GACATTATTA TTACCAACCG CTATGCCGAC GAATTAAAAG ATGTAATAGG GAAGGTTTAT ACAAGAGACT TATTTGGTGA GGATTGA
|
Protein sequence | MKIAISGTGY VGLSNGLLLA QQHQVVALDI VAEKVAMLNQ RKSPINDAEI ERFLQHETLN FSATLDKHEA YADAQFVIIA TPTDYDPHTN YFNTSSVEAV IRDVLAINPQ AIMVIKSTVP VGFTEKISQQ LDTDNIIFSP EFLREGKALY DNLYPSRIVV GERSERARFF ANLLMECALK KDIRVLFTDP TEAEAIKLFA NTFLAMRVAY FNELDSYAES LGLNTRQIIE GVCLDPRIGN YYNNPSFGYG GYCLPKDTRQ LLANYRTVPN NLIKAIVDAN HTRKDFIADT IIRRHPKTVG VHRLIMKAGS DNFRFSSIQG IMKRIKAKGI NVVVYEPGID DDDFLDFPVI HQLDSFKQQC DIIITNRYAD ELKDVIGKVY TRDLFGED
|
| |