Gene PC1_2884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2884 
Symbol 
ID8133839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3263672 
End bp3264370 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content58% 
IMG OID644866170 
Productregulatory protein DeoR 
Protein accessionYP_003018446 
Protein GI253689256 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGG CTGACCGCCG ATATGACCGG CTGGCCGTCA GGCTGTCATT GATCATCAGC 
CGATTACTGG CGGGCGAAAC GCTGAGCGTC AGAAAACTGG CGGCAGAGTT CGGCGTCTCG 
ACCCGTACCT TGCGGCGGGA CTTTCGTGAA CGGCTGATGT ATCTCGACCT GGAATACCGT 
AACGGTCTTT GCCGTTTGCC GGAGCACCAT AACCCGGCAC GTCATGAGCA GGATGTGTTG 
ATGTTTGCCC GCCAGACTGG CGTAGGTGTG TTCTTTCCCG GTCTGGATAA CCGGCTGGTA 
AACACCCTGC TGGACAGCGG CGAGGACGCA CCCTGTCTGG TCTGGCATCC ACCCTTGCGT 
GGTACGCCGA CACTGCCGGG GCATTTTTAC CGCCTGACTC GTGCAATTGG TGAGCAGCTA 
CGTGTCACGG TTTTGGCCGA CGGTCAGCGC TATGACGGGT TATCACCTTA CCGGCTTATC 
TGCCTGTACG GCGAATGGTA TCTGGTGGCC GAATCTCTGG GGCATCTTCT GGTCCTGCCG 
CTGCATGAGA TTCACGGTGT GACGGTGTCT ACCGAGTCAT TCCAGCGCCG CGATGATATC 
TGCCACCTGA CCACGCAATC CGGCTTCATC ACGGCATTGC CGCATTTTCG CTTTATTCAC 
GATGTTCTGA CCACTTTCGG CACGTCTCCG ACCACATAA
 
Protein sequence
MTQADRRYDR LAVRLSLIIS RLLAGETLSV RKLAAEFGVS TRTLRRDFRE RLMYLDLEYR 
NGLCRLPEHH NPARHEQDVL MFARQTGVGV FFPGLDNRLV NTLLDSGEDA PCLVWHPPLR 
GTPTLPGHFY RLTRAIGEQL RVTVLADGQR YDGLSPYRLI CLYGEWYLVA ESLGHLLVLP 
LHEIHGVTVS TESFQRRDDI CHLTTQSGFI TALPHFRFIH DVLTTFGTSP TT