| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2821 |
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| Symbol | fadJ |
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| ID | 8133774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3193804 |
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| End bp | 3195987 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866109 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_003018387 |
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| Protein GI | 253689197 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATC AACAGCCTTT CTCTGCCATA ACGGAAAGCC CCTCTGCCTT TTCCCTCACG
ATTCGGCCGG ATAATATCGG CGTGATCGGC ATTGACGTTC CCGGCGAGAA GGTAAACACG
CTAAAAAGCG AATTTGCACA GCAGATTCTT TCGGTCTTCG AGCAAGCGCG ACAACATGCG
ACGCTCAGGG GGCTGATCCT GATTTCCTCC AAACCTGATT CGTTTATCGC GGGTGCGGAC
ATCACCATGT TGAACCAGTG TCGCAGTGCT GAACAGGCTG AAAATCTGGC AAAGCAGGGG
CAGGAAACCT TTGAGCAGAT TGCTGCATTA CCGTTCCCCG TGGTGGCCGC GATTCACGGC
GCTTGTCTGG GCGGCGGGCT GGAACTGGCA TTAGCCTGCG ATTATCGCGT TTGTTCGCTG
GATGAAAAAA CGGTGCTGGG GTTACCGGAA GTGCAGCTTG GACTCCTTCC CGGATCAGGC
GGAACGCAGC GTTTGCCGCG GTTGATTGGT CTGGATAGCG CGCTCGATCT CATTCTGACC
GGTCGCCATC TCCGCGCGAA TCAGGCGTTA CGGCAGGGAC TGGTCGATGA GGCCGTTCCG
CACGATATTC TGCTGGATAC CGCAGTCGAG ATGCTCAAAA AAGGAAAACG TAAAGCGGAG
CCGCTAGGCT GGCGGTCGCG CCTGCTGAGC AGTCCGGGCA TTCGCCATGT ACTTTTCAAG
ATGGTGAAGC GTAAAACCCG TGCGAAAACA CACGGCAACT ATCCGGCCAC TGAAAAGATT
ATTCAGGTCG TGCGCCGGGG AGTGGAAAAG GGTCGTGAAG AAGGATACCG ACAGGAGGCG
CGGGCGTTCG GTAAGCTGGT GATGACGCCG GAATCTGCCG CGCTACGCCA TTTGTTCTTT
GCTTCCAACG CATTAAAGAA AACCTCTGGT GCAGCCTCTG ACGCGAAACC GATCCACTAC
GTCGGCATTC TTGGCGGCGG GTTGATGGGA GGAGGGATCG CCAGCGTGAC GGCGACGCGC
GGGCAGTTGC CGGTGCGGAT TAAAGATATC AATGAGCAGG GTATCAACCA TGCGTTGAAG
TACAACTGGC AACTGTTGAC CCAGCGCGTT CAGCGTAAAC GGATGAAGCC GACGGAGCGT
CAGCGGTTGA TGACGTTGAT TTCCGGCAGT ACGGATTATC GCGGGTTTGA ACATGCGGAT
ATTGTCATTG AGGCCGTGTT CGAAGATCTG GCGCTGAAGC GGCAAATGGT GGCGGAGATT
GAAGATCATG CCGCACCGCA TACGATTTTC GCATCCAACA CCTCATCGCT GCCAATCCAT
CAGATTGCGG AAGGCGCGCG CCGTCCACAG CAGGTTATTG GGCTGCACTA TTTTAGTCCG
GTAGACAAAA TGCCGCTGGT TGAAGTGATT CCCCATGCTC ATACCAGTGC CGAAACGGTG
GCGACGACGG TTGCTCTAGC CAGAAAGCAG GGAAAAACCG CGATCGTCGT GGGTGACAGC
GCCGGTTTTT ATGTGAACCG CATATTGGCA CCTTATATCA ATGAAGCGGC TTACTGCCTG
CTGGAAGGCG AGCCAATTGA ATCGATCGAC TATGCGCTGG TGCGCTTTGG TTTCCCCGTT
GGTCCGTTTG CGCTGCTTGA TGAAGTGGGC ATCGATGTCG CGACCAAAAT TGTGCCAGTG
CTAAGTGAAG AACTGGGCAC ACGTTTCACC TCTCCGCCTG CGTTTGATGC GATCCTGAAA
GATGGGCGCA AAGGGCGTAA GAATGGGAAA GGGTTCTATC GATACAATAA AACGCGCCGT
TTCTGGCAGA CGGGGAGGGA GGTTGATAGC TCAATTTACC CGCTGCTGGA TGTGACGGCA
AAGGCTCACA TCGACCCTGC GCTAATTAGC CAACGTGGCG TAATGATGAT GCTGAATGAG
GCGGCGCGTT GCCTGGATGA AGGTGTGATT CAATGTGCGC GCGATGGTGA TATCGGGGCG
GTCTTTGGTA TTGGTTTCCC ACCGTTTCTT GGCGGACCGT TCCACTACAT GGATCGTCTG
GGGATGGAAA CCGTCGTGAA AACACTACTG GTGCTGCAAC AACAGTATGG CGATCGGTTC
GCGCCCTGTG AGCGTTTGCT TGCGATGCGG GAAGGTCAGC GGACGTTTTA TCCGCCAACC
GATGAGGACG ATAGCGCTAG TTAA
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| Protein sequence | MNDQQPFSAI TESPSAFSLT IRPDNIGVIG IDVPGEKVNT LKSEFAQQIL SVFEQARQHA
TLRGLILISS KPDSFIAGAD ITMLNQCRSA EQAENLAKQG QETFEQIAAL PFPVVAAIHG
ACLGGGLELA LACDYRVCSL DEKTVLGLPE VQLGLLPGSG GTQRLPRLIG LDSALDLILT
GRHLRANQAL RQGLVDEAVP HDILLDTAVE MLKKGKRKAE PLGWRSRLLS SPGIRHVLFK
MVKRKTRAKT HGNYPATEKI IQVVRRGVEK GREEGYRQEA RAFGKLVMTP ESAALRHLFF
ASNALKKTSG AASDAKPIHY VGILGGGLMG GGIASVTATR GQLPVRIKDI NEQGINHALK
YNWQLLTQRV QRKRMKPTER QRLMTLISGS TDYRGFEHAD IVIEAVFEDL ALKRQMVAEI
EDHAAPHTIF ASNTSSLPIH QIAEGARRPQ QVIGLHYFSP VDKMPLVEVI PHAHTSAETV
ATTVALARKQ GKTAIVVGDS AGFYVNRILA PYINEAAYCL LEGEPIESID YALVRFGFPV
GPFALLDEVG IDVATKIVPV LSEELGTRFT SPPAFDAILK DGRKGRKNGK GFYRYNKTRR
FWQTGREVDS SIYPLLDVTA KAHIDPALIS QRGVMMMLNE AARCLDEGVI QCARDGDIGA
VFGIGFPPFL GGPFHYMDRL GMETVVKTLL VLQQQYGDRF APCERLLAMR EGQRTFYPPT
DEDDSAS
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