| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2782 |
|---|
| Symbol | |
|---|
| ID | 8133735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3157578 |
|---|
| End bp | 3158228 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644866070 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003018348 |
|---|
| Protein GI | 253689158 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000698062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAC AAAGTCAGGC AGCAGGCACA GAGTGGGTTG ATATCGTCAA TGAAAACAAC
GAGGTAATTG CTCAGTCAAG TCGTCAGCAG ATGCGTGCGC AGAGTCTTCG CCATCGTGCT
ACTTACATTG TTGTGCATGA TGGAATGGGT AAAATTCTGG TGCAGCGCCG GACCAAGATC
AAAGACTTCT ACCCAGGCTG GCTGGATGCG ACCGCAGGTG GTGTGGTGCA AAGTGGTGAG
CAAATGCTGG AATCCGCACG TCGTGAAGCG GAAGAAGAAC TTGGTATTGC TGGCGTGCCG
TTCGCAGAAC ATGGCTTGTT CTATTACGAA GGCGAAAATT GCCGGGTGTG GGGCGGGCTG
TTTAGCTGTG TTACCCACGG GCCGTTCGCG TTACAAGAAG AAGAAGTGGA TGAGGTTAGC
TGGTTGACGC CGCAAGAGAT CACCGCGCGC TGCGATGAGT TTACGCCGGA TTCCCTCAAA
GCCCTGTCGC TGTGGCTGAC GCGCTATAGC GATCAGGAAT ACGGCAAGCC GATTTCACGC
AAACTGAATG AGGTGGTAGA AGCTGCTGAG ACATCTGCTG TTCAGCATGA CAATGTTGAT
GATGAGAACG GCAGCAACGT TGCTCCATCG GAAACGGATT CGCAGAAATA A
|
|---|
| Protein sequence | MAEQSQAAGT EWVDIVNENN EVIAQSSRQQ MRAQSLRHRA TYIVVHDGMG KILVQRRTKI
KDFYPGWLDA TAGGVVQSGE QMLESARREA EEELGIAGVP FAEHGLFYYE GENCRVWGGL
FSCVTHGPFA LQEEEVDEVS WLTPQEITAR CDEFTPDSLK ALSLWLTRYS DQEYGKPISR
KLNEVVEAAE TSAVQHDNVD DENGSNVAPS ETDSQK
|
|---|
| |