| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2768 |
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| Symbol | |
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| ID | 8133721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3140781 |
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| End bp | 3142130 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866056 |
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| Product | NADH dehydrogenase I subunit F |
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| Protein accession | YP_003018334 |
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| Protein GI | 253689144 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.261993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA ACATTGTTCT GACTGCTGAG CATCATCCTC TTACCTGGCG TTTACGCGCA
GACAAACAGC CAGTATGGCT GGATGAATAT CGCAGCAAAA ACGGCTATGT CGCGGCGCAA
AAAGCGTTAA CCGGCATGGC GCAGGATGAA GTGGTCTCAC TGGTTAAAGA CGCTGGCCTG
AAAGGGCGTG GCGGCGCGGG CTTTTCGACA GGCTTGAAGT GGAGCCTGAT GCCGAAAGAC
GAAAGCATGA ACATCCGCTA CCTGCTGTGT AACGCGGATG AGATGGAGCC AGGGACTTAT
AAAGACCGCC TGCTGATGGA GCAAGAACCC CATCTGCTGG TTGAAGGTAT GTTGATCAGC
GCGTTTGCGC TGAAAGCCTA CCGCGGTTAC ATCTTCCTGC GTGGTGAATA CATCGAAGCT
GCCGTCCACC TACGTCGGGC AATCGAAGAA GCGAAAGCCG CTGGCCTGCT GGGCAAGAAT
ATTCTGGGTA GCGGGTTTGA TTTCGAGCTG TTCGTGCACA CGGGCGCAGG GCGTTATATC
TGCGGTGAAG AAACGGCACT GATTAACTCG CTGGAAGGCC GTCGTGCCAA CCCACGTTCG
AAGCCGCCAT TCCCGGCGTC TGCGGGTGTT TGGGGTAAAC CGACCTGCGT CAACAACGTG
GAAACGCTGT GTAACGTACC GGCGATTATC GAACACGGTG CGGCGTGGTA TCAGGGGTTG
TCTGCGGGTA AAAGTAAAGA TGCCGGCACG AAACTGATGG GCTTCTCCGG CCGCGTCAAG
AATCCTGGCC TGTGGGAACT GCCGTTTGGC ACCACGGCGC GTGAAATTCT GGAAGACTAC
GCGGGCGGTA TGCGCGATGG TCTGAAACTG AAAGCCTGGC AACCGGGCGG CGCAGGGACG
GATTTCCTGA CGGAAAACCA TCTCGATCTG CCGATGGATT TTGAGCACAT TGCGAAAGCC
GGTAGCCGTA TGGGTACGGC GCTGGCGATG GCTGTCGATC ACGAAATCAA TATGGTTTCG
CTGACGCGCA ATCTGGAAGA GTTCTTTGCC CGTGAATCCT GTGGCTGGTG TACGCCGTGC
CGCGATGGTT TGCCGTGGAG CGTGAAGATT CTGCGTGCGC TGGAAAATGG TGAAGGCCAG
CCTGGCGATA TCGAAACGCT GGAACAGCTT TGCCGTTTCC TCGGACCGGG TAACACCTTC
TGTGCGCATG CGCCGGGTGC GGTCGAACCG CTGCAAAGTG CCATCAAGTA TTTCCGGGAA
GAATTCGAAG CGGGTATCTC TAAACAGTAT TTAGGCAACG TCAAAGCGAT TGGCGGTATT
CAGCCTAACC TGTTGAAAGA GCGCTGGTAA
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| Protein sequence | MSKNIVLTAE HHPLTWRLRA DKQPVWLDEY RSKNGYVAAQ KALTGMAQDE VVSLVKDAGL
KGRGGAGFST GLKWSLMPKD ESMNIRYLLC NADEMEPGTY KDRLLMEQEP HLLVEGMLIS
AFALKAYRGY IFLRGEYIEA AVHLRRAIEE AKAAGLLGKN ILGSGFDFEL FVHTGAGRYI
CGEETALINS LEGRRANPRS KPPFPASAGV WGKPTCVNNV ETLCNVPAII EHGAAWYQGL
SAGKSKDAGT KLMGFSGRVK NPGLWELPFG TTAREILEDY AGGMRDGLKL KAWQPGGAGT
DFLTENHLDL PMDFEHIAKA GSRMGTALAM AVDHEINMVS LTRNLEEFFA RESCGWCTPC
RDGLPWSVKI LRALENGEGQ PGDIETLEQL CRFLGPGNTF CAHAPGAVEP LQSAIKYFRE
EFEAGISKQY LGNVKAIGGI QPNLLKERW
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